DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7656 and vih

DIOPT Version :9

Sequence 1:NP_648783.4 Gene:CG7656 / 39691 FlyBaseID:FBgn0036516 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_648582.1 Gene:vih / 44118 FlyBaseID:FBgn0264848 Length:178 Species:Drosophila melanogaster


Alignment Length:174 Identity:57/174 - (32%)
Similarity:84/174 - (48%) Gaps:24/174 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GSGSLATSSSAAAPTTTPSSSAVRALAMEYKSLQEEPVEGFRVKLINDDNLFEWEVAIFGPPDTL 84
            |.||..:..|.........|..:....|......|..:..|.    :.:|:|:|...|.||.:|:
  Fly    15 GGGSKHSDDSMPVKDNHAVSKRLHKELMNLMMANERGISAFP----DGENIFKWVGTIAGPRNTV 75

  Fly    85 YQGGYFKAHMKFPHDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPT 149
            |.|..::..:.||:.|||:.|.::|||..:||||...|.:|:.||.             ::|:..
  Fly    76 YSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILK-------------DKWSAL 127

  Fly   150 QNVRTILLSVISLLNEPNTFSPANVDASVMYRRWRDSQGKDNEY 193
            .:|||||||:.|||.|||..||.|..|::|   |.|.:    ||
  Fly   128 YDVRTILLSIQSLLGEPNNESPLNAQAAMM---WNDQK----EY 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7656NP_648783.4 UBCc 42..186 CDD:238117 49/143 (34%)
COG5078 45..182 CDD:227410 48/136 (35%)
vihNP_648582.1 COG5078 31..166 CDD:227410 53/158 (34%)
UQ_con 36..172 CDD:278603 52/153 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438039
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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