DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7656 and Ube2d1

DIOPT Version :9

Sequence 1:NP_648783.4 Gene:CG7656 / 39691 FlyBaseID:FBgn0036516 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_017457176.1 Gene:Ube2d1 / 361831 RGDID:1307886 Length:194 Species:Rattus norvegicus


Alignment Length:135 Identity:53/135 - (39%)
Similarity:72/135 - (53%) Gaps:14/135 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 MEYKSLQEEPVEGFRVKLINDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPHDYPYSPPSIRFLT 111
            ||...||.:|........:.|| ||.|:..|.||||:.||||.|...:.||.|||:.||.|.|.|
  Rat    55 MELSDLQRDPPAHCSAGPVGDD-LFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTT 118

  Fly   112 KVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQNVRTILLSVISLLNEPNTFSPANVDA 176
            |::|||:..||.:|:.||.             .:|:|...|..:|||:.|||.:||...|...|.
  Rat   119 KIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDI 170

  Fly   177 SVMYR 181
            :.:|:
  Rat   171 AQIYK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7656NP_648783.4 UBCc 42..186 CDD:238117 53/135 (39%)
COG5078 45..182 CDD:227410 53/135 (39%)
Ube2d1XP_017457176.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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