DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7656 and ben

DIOPT Version :10

Sequence 1:NP_648783.4 Gene:CG7656 / 39691 FlyBaseID:FBgn0036516 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster


Alignment Length:144 Identity:50/144 - (34%)
Similarity:80/144 - (55%) Gaps:16/144 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SSAVRALAMEYKSLQEEPVEGFRVKLINDDNLFEW-EVAIFGPPDTLYQGGYFKAHMKFPHDYPY 102
            ||..|.:..|.:.|.:|||.|  :..|.|:|...: .|.:.||.|:.::||.||..:..|.|||.
  Fly     2 SSLPRRIIKETQRLMQEPVPG--INAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPM 64

  Fly   103 SPPSIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQNVRTILLSVISLLNEPN 167
            |.|.:||:||::|||:...|.:|:.:|.             ::|:|...:||||||:.:||:.||
  Fly    65 SAPKVRFITKIYHPNIDRLGRICLDVLK-------------DKWSPALQIRTILLSIQALLSAPN 116

  Fly   168 TFSPANVDASVMYR 181
            ...|...|.:.:::
  Fly   117 PDDPLANDVAELWK 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7656NP_648783.4 UBCc_UBE2R 43..212 CDD:467423 48/140 (34%)
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 48/142 (34%)

Return to query results.
Submit another query.