DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7656 and ube2d3

DIOPT Version :9

Sequence 1:NP_648783.4 Gene:CG7656 / 39691 FlyBaseID:FBgn0036516 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_005156599.1 Gene:ube2d3 / 321832 ZFINID:ZDB-GENE-030131-551 Length:148 Species:Danio rerio


Alignment Length:160 Identity:49/160 - (30%)
Similarity:79/160 - (49%) Gaps:21/160 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AVRALAMEYKSLQEEPVEGFRVKLINDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPHDYPYSPP 105
            |::.:..|...|..:|........:.|| :|.|:..|.||.::.||||.|...:.||.|||:.||
Zfish     2 ALKRIQKELTDLARDPPAQCSAGPVGDD-VFHWQATIMGPNESPYQGGVFFLTIHFPTDYPFKPP 65

  Fly   106 SIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQNVRTILLSVISLLNEPNTFS 170
            .:.|.|:::|||:..||.:|:.||.             .:|:|...:..:|||:.|||.:||...
Zfish    66 KVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDD 117

  Fly   171 PANVDASVMYRRWRDSQGKDNEYPNIIRKQ 200
            |...:.:.:|:       .|.|..|.:.|:
Zfish   118 PLVPEIARIYK-------TDTEKYNRMAKE 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7656NP_648783.4 UBCc 42..186 CDD:238117 44/143 (31%)
COG5078 45..182 CDD:227410 44/136 (32%)
ube2d3XP_005156599.1 UBCc 1..146 CDD:412187 49/160 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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