DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7656 and Ube2j1

DIOPT Version :9

Sequence 1:NP_648783.4 Gene:CG7656 / 39691 FlyBaseID:FBgn0036516 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001100112.2 Gene:Ube2j1 / 297961 RGDID:1305067 Length:318 Species:Rattus norvegicus


Alignment Length:250 Identity:65/250 - (26%)
Similarity:101/250 - (40%) Gaps:75/250 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SSAVRALAMEYKSLQEEPVEGFRVKLINDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPHDYPYS 103
            |.||:.|..|...| ::|.:.:..:.: :||||||...:.||||:.:.||.:...:..|.:||..
  Rat     9 SPAVKRLMKEAAEL-KDPTDHYHAQPL-EDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMK 71

  Fly   104 PPSIRFLTKVWHPNVYENG------DLCISILHPPVDDPQSGELPCERWNPTQNVRTILLSVISL 162
            ||||..||        .||      .:|:||         ||..| |.|.|:.::||.||::|..
  Rat    72 PPSIILLT--------ANGRFEVGKKICLSI---------SGHHP-ETWQPSWSIRTALLAIIGF 118

  Fly   163 LNEPNTFSPANVDASVMYRR---------------------------WRDSQGKDNEYPNIIRKQ 200
            :......:..::|.:...||                           ..||...|.|...:.|: 
  Rat   119 MPTKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVLLPLKSGIDSSQADQEAKELARQ- 182

  Fly   201 ALAANAEAKREGIVVPMTLEDYCLKPTRKPTTESGLDANFYDDDFDLETEDDLPS 255
             ::..||....|                |...||.|:.:|..:|    ::||||:
  Rat   183 -ISFKAEVNSSG----------------KTIAESDLNQSFSLND----SQDDLPT 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7656NP_648783.4 UBCc 42..186 CDD:238117 45/176 (26%)
COG5078 45..182 CDD:227410 42/142 (30%)
Ube2j1NP_001100112.2 UBCc 12..>119 CDD:238117 42/126 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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