DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7656 and let-70

DIOPT Version :9

Sequence 1:NP_648783.4 Gene:CG7656 / 39691 FlyBaseID:FBgn0036516 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_502065.1 Gene:let-70 / 178006 WormBaseID:WBGene00002344 Length:147 Species:Caenorhabditis elegans


Alignment Length:145 Identity:48/145 - (33%)
Similarity:77/145 - (53%) Gaps:14/145 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AVRALAMEYKSLQEEPVEGFRVKLINDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPHDYPYSPP 105
            |::.:..|.:.|..:|........:.|| ||.|:..|.|||::.||||.|...:.||.|||:.||
 Worm     2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPP 65

  Fly   106 SIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQNVRTILLSVISLLNEPNTFS 170
            .:.|.|:::|||:..||.:|:.||.             .:|:|...:..:|||:.|||.:||...
 Worm    66 KVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDD 117

  Fly   171 PANVDASVMYRRWRD 185
            |...:.:.:|:..|:
 Worm   118 PLVPEIARIYKTDRE 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7656NP_648783.4 UBCc 42..186 CDD:238117 47/144 (33%)
COG5078 45..182 CDD:227410 46/136 (34%)
let-70NP_502065.1 UBCc 1..146 CDD:412187 48/145 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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