DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7656 and ubc-14

DIOPT Version :9

Sequence 1:NP_648783.4 Gene:CG7656 / 39691 FlyBaseID:FBgn0036516 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001370084.1 Gene:ubc-14 / 173228 WormBaseID:WBGene00006709 Length:170 Species:Caenorhabditis elegans


Alignment Length:160 Identity:76/160 - (47%)
Similarity:102/160 - (63%) Gaps:4/160 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AVRALAMEYKSLQEEPVEGFRVKLINDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPHDYPYSPP 105
            |::.|..|||.|...|.||.....|::||.||||..|.||.:|.:..|.|.|.:.||.|||.|||
 Worm     5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSPP 69

  Fly   106 SIRFLTKVWHPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQNVRTILLSVISLLNEPNTFS 170
            .:||...::|||:|.:|.:||||||.|.|||...||..|||:|.|::..|||||:|:|.|||..|
 Worm    70 KMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSMLAEPNDES 134

  Fly   171 PANVDASVMYRRWRDSQGK-DNEYPNIIRK 199
            ||||.|:.|   ||:.:.: :....:::||
 Worm   135 PANVSAAKM---WREDRAQFEKIADSLVRK 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7656NP_648783.4 UBCc 42..186 CDD:238117 73/143 (51%)
COG5078 45..182 CDD:227410 71/136 (52%)
ubc-14NP_001370084.1 UQ_con 8..159 CDD:395127 73/153 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1317014at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.