DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7656 and ube2c

DIOPT Version :9

Sequence 1:NP_648783.4 Gene:CG7656 / 39691 FlyBaseID:FBgn0036516 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001095283.1 Gene:ube2c / 100124324 XenbaseID:XB-GENE-971108 Length:179 Species:Xenopus tropicalis


Alignment Length:177 Identity:56/177 - (31%)
Similarity:92/177 - (51%) Gaps:21/177 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ASTSQHATSSSTMMAGSGSLATSSSAAAPTTTPSSSAVRALAMEYKSLQEEPVEGFRVKLINDDN 69
            ||.:....::|::.|..|..:.:|:|       ..|..:.|..|..:|.....:|... ....||
 Frog     2 ASQNVDPAAASSVTARKGQESGTSAA-------RGSVGKRLQQELMTLMMSGDKGISA-FPESDN 58

  Fly    70 LFEWEVAIFGPPDTLYQGGYFKAHMKFPHDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPVD 134
            ||:|...|.|...|:|:...:|..::||..|||:.|:::|:|..:||||..:|::|:.||.    
 Frog    59 LFKWIGTIDGAVGTVYESLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILK---- 119

  Fly   135 DPQSGELPCERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYR 181
                     ::|:...:|||||||:.|||.|||..||.|..|:.:::
 Frog   120 ---------DKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQ 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7656NP_648783.4 UBCc 42..186 CDD:238117 48/140 (34%)
COG5078 45..182 CDD:227410 48/137 (35%)
ube2cNP_001095283.1 UQ_con 34..170 CDD:365926 48/138 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.