DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO and AAR3

DIOPT Version :10

Sequence 1:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_189539.1 Gene:AAR3 / 822537 AraportID:AT3G28970 Length:295 Species:Arabidopsis thaliana


Alignment Length:205 Identity:65/205 - (31%)
Similarity:100/205 - (48%) Gaps:46/205 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 SKLVLIIAWKFHAEVQCEFSRDEFINGMCDLGIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFN 168
            ::|:.::..||.|.           |.:    .|.:.||.::|.::.    |..:|..||.|.|.
plant    50 TQLLYLVENKFQAR-----------NSI----FDELFKLMSRLDLMV----DFTEFTCFYDFVFF 95

  Fly   169 YAKDPGQKGIDLEMAIAYWCIVLSGRFKFLDIWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMS 233
            ..::.|||.|.:..||..|.:||:|||:.|:.||.|:|:..:..||.|||..:|.|:..:.:.:.
plant    96 MCRENGQKNITISRAITAWKLVLAGRFRLLNRWCDFIEKNQRHNISEDTWQQVLAFSRCVHENLE 160

  Fly   234 NYDSEGAWPVLIDDFVE--------------WC------------QENDHLKEDSSPASGYQQ-Q 271
            .||||||||||||||||              :|            ||::|.|:...|.:|.:. .
plant   161 GYDSEGAWPVLIDDFVEHMYSILGPNKDTSLFCKCGDTESESCLYQEDEHHKDYRRPHTGLRNIP 225

  Fly   272 SSASSSSQKN 281
            .....:|:||
plant   226 GLKRKTSKKN 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:473871
Cullin_binding 141..251 CDD:460971 49/123 (40%)
AAR3NP_189539.1 Cullin_binding 76..178 CDD:460971 46/105 (44%)
Blue background indicates that the domain is not in the aligned region.

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