DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO and Dcun1d2

DIOPT Version :10

Sequence 1:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001128270.1 Gene:Dcun1d2 / 688913 RGDID:1582994 Length:259 Species:Rattus norvegicus


Alignment Length:249 Identity:149/249 - (59%)
Similarity:193/249 - (77%) Gaps:6/249 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 INKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRE-----LDRKR 69
            ::||||: .:|||::|::.|...|:|||:||.||:||.:.|:|::|||||.::||     :|:|:
  Rat     1 MHKLKSA-QKDKVRQFMACTQASEKTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSVDQKK 64

  Fly    70 IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDL 134
            :|||:.||:||.|..|||..|:..|.:||.|.|.|..||:|||:|.|..|||||:.||::||.:|
  Rat    65 LEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWRFRAATQCEFSKKEFVDGMTEL 129

  Fly   135 GIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRFKFLD 199
            |.||.::||..||.|||||.|:.||||||.|||.:||:|||||:|||||:|||.:||||||||||
  Rat   130 GCDSTERLKALLPKLEQELKDSAKFKDFYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGRFKFLD 194

  Fly   200 IWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVEWCQ 253
            :|..||.|.|||:|.||||||||||...|.|.:||||.|||||||||||||:.:
  Rat   195 LWNTFLLEHHKRSIPRDTWNLLLDFGNMIADDLSNYDEEGAWPVLIDDFVEYAR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:473871 23/46 (50%)
Cullin_binding 141..251 CDD:460971 80/109 (73%)
Dcun1d2NP_001128270.1 UBA_like_SF 2..48 CDD:473871 23/46 (50%)
Cullin_binding 136..246 CDD:460971 80/109 (73%)

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