DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO and dcun1d1

DIOPT Version :9

Sequence 1:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001016315.1 Gene:dcun1d1 / 549069 XenbaseID:XB-GENE-5967384 Length:259 Species:Xenopus tropicalis


Alignment Length:249 Identity:160/249 - (64%)
Similarity:198/249 - (79%) Gaps:6/249 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 INKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRE-----LDRKR 69
            :|||||| .:|||::|:..|.:.|:||:.||.|||||.::|:||:|||||.|.||     ||||:
 Frog     1 MNKLKSS-QKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKK 64

  Fly    70 IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDL 134
            :|||:.||:||.|..|||..|:..|.:||.|.|.|..||||||||.|..|||||:.||::||.:|
 Frog    65 LEQLYNRYKDPLDENKIGIDGIQQFCDDLALDPASVSVLIIAWKFRAATQCEFSKQEFMDGMTEL 129

  Fly   135 GIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRFKFLD 199
            |.|||:|||.:||.:||||.:.|:|||||.||||:||:|||||:|||||||||.:||||||||||
 Frog   130 GCDSIEKLKAQLPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLSGRFKFLD 194

  Fly   200 IWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVEWCQ 253
            :|.:||.|.|||:|.:|||||||||:|.|.|.|||||.|||||||||||||:.:
 Frog   195 LWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFAR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:304366 26/46 (57%)
Cullin_binding 141..252 CDD:281545 83/110 (75%)
dcun1d1NP_001016315.1 UBA_DCNL1 1..51 CDD:270594 29/50 (58%)
Cullin_binding 136..246 CDD:367560 82/109 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 181 1.000 Domainoid score I3425
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10773
Inparanoid 1 1.050 332 1.000 Inparanoid score I2382
OMA 1 1.010 - - QHG53724
OrthoDB 1 1.010 - - D1418097at2759
OrthoFinder 1 1.000 - - FOG0000501
OrthoInspector 1 1.000 - - oto104762
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2084
SonicParanoid 1 1.000 - - X1511
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.010

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