DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO and dcun1d1

DIOPT Version :9

Sequence 1:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_956066.1 Gene:dcun1d1 / 327232 ZFINID:ZDB-GENE-030131-5443 Length:257 Species:Danio rerio


Alignment Length:248 Identity:154/248 - (62%)
Similarity:194/248 - (78%) Gaps:5/248 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 INKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRE----LDRKRI 70
            :|||||| .:|||::|:..|.:.|:.|:.||.|||||.::|:||:||:|:.|.:.    ||||::
Zfish     1 MNKLKSS-QKDKVRQFMIFTQSNEKAALNCLSQNDWKLDVATDNFFQHPDLYVQNLKGTLDRKKL 64

  Fly    71 EQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDLG 135
            |||:.|||||.|..|||..|:..|.:||.|.|.|..||:|||||.|..|||||:.||:.||.:.|
Zfish    65 EQLYNRYRDPQDDNKIGIDGIQQFCDDLGLDPASISVLLIAWKFRAATQCEFSKQEFMEGMAEQG 129

  Fly   136 IDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRFKFLDI 200
            .|||:|||.:||.:||||.|.|||||||.||||:||:|||||:|||||||||.::|:|||||||:
Zfish   130 CDSIEKLKAQLPRMEQELKDQGKFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLILAGRFKFLDL 194

  Fly   201 WCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVEWCQ 253
            |.:||.|.|||:|.:|||||||||:|.|.|.|||||.|||||||||||||:.:
Zfish   195 WNKFLLEHHKRSIPKDTWNLLLDFSTMITDDMSNYDEEGAWPVLIDDFVEFAR 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:304366 25/46 (54%)
Cullin_binding 141..252 CDD:281545 83/110 (75%)
dcun1d1NP_956066.1 UBA_like_SF 1..51 CDD:304366 26/50 (52%)
Cullin_binding 135..246 CDD:281545 83/110 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575952
Domainoid 1 1.000 183 1.000 Domainoid score I3364
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10773
Inparanoid 1 1.050 334 1.000 Inparanoid score I2394
OMA 1 1.010 - - QHG53724
OrthoDB 1 1.010 - - D1418097at2759
OrthoFinder 1 1.000 - - FOG0000501
OrthoInspector 1 1.000 - - otm25104
orthoMCL 1 0.900 - - OOG6_102228
Panther 1 1.100 - - O PTHR12281
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1511
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

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