DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO and SPBC839.03c

DIOPT Version :9

Sequence 1:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001342892.1 Gene:SPBC839.03c / 2541135 PomBaseID:SPBC839.03c Length:251 Species:Schizosaccharomyces pombe


Alignment Length:258 Identity:76/258 - (29%)
Similarity:128/258 - (49%) Gaps:23/258 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKRIEQLFMRYRDPSDPLKIG 87
            :.|...|.|..:.|:..|::.::.:::|...:.|...   ||...|::..:|.::....|...|.
pombe    10 RAFSKATSTSSKAALSWLKKYNFDYDVAYTKWIQQKS---REEAEKQLNNVFSQFSSKEDKDLIE 71

  Fly    88 SQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDLGIDSIDKLKTKLPILEQE 152
            ..|.:.....||:..:....|::::...:....||.|:.|:.|..:|...|:|:|  ||.|.|:.
pombe    72 LDGSVQLFTALDISLEDPETLLVSYFLKSPRMGEFHRESFVEGALNLSTTSLDQL--KLAIKEKV 134

  Fly   153 ---LNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRFKFLDIWCQFLEEKH--KRA 212
               .:||...|..|.:|:..|.|.|:|.:...:||.::.|:|...|..||.|..||:...  :::
pombe   135 QVWRSDASLQKAIYIYTYPLACDKGKKTLSTSIAIEFFQILLKDTFPLLDDWIAFLKVSPIIEKS 199

  Fly   213 ISRDTWNLLLDFATNI--DDRMSNYDSEGAWPVLIDDFVEWCQENDHLKEDSSPASGYQQQSS 273
            :.:||||.|.||:..:  |...||||.|||||.|||:||.:.:|:           ||:..||
pombe   200 LPKDTWNELWDFSVFVKSDPNCSNYDFEGAWPTLIDEFVSYYREH-----------GYKNSSS 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:304366 7/34 (21%)
Cullin_binding 141..252 CDD:281545 46/117 (39%)
SPBC839.03cNP_001342892.1 Cullin_binding 125..240 CDD:308909 46/116 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 77 1.000 Domainoid score I2415
eggNOG 1 0.900 - - E1_KOG3077
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I1538
OMA 1 1.010 - - QHG53724
OrthoFinder 1 1.000 - - FOG0000501
OrthoInspector 1 1.000 - - otm47276
orthoMCL 1 0.900 - - OOG6_102228
Panther 1 1.100 - - O PTHR12281
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2084
SonicParanoid 1 1.000 - - X1511
TreeFam 1 0.960 - -
1312.860

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