DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCCRO and dcun1d2a

DIOPT Version :9

Sequence 1:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_991101.1 Gene:dcun1d2a / 192303 ZFINID:ZDB-GENE-020416-2 Length:259 Species:Danio rerio


Alignment Length:249 Identity:156/249 - (62%)
Similarity:199/249 - (79%) Gaps:6/249 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 INKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRE-----LDRKR 69
            ::||||| .:|||::|:|.|..||:||::||.|||||.|:|:|||||||:.|::|     :|||:
Zfish     1 MHKLKSS-QKDKVRQFMSFTQAGEKTAVYCLTQNDWKLEVATDNYFQNPDLYHKESMKSSVDRKK 64

  Fly    70 IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDL 134
            :|||:.||:||.|..|||..|:..|.:||:|.|.|..||::||||.|..|||||:.|||:||.:|
Zfish    65 LEQLYNRYKDPQDENKIGIDGIQQFCDDLNLDPASISVLVVAWKFRAATQCEFSKKEFIDGMTEL 129

  Fly   135 GIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRFKFLD 199
            |.||.:||:..||.|||:|.|:|||||||.||||:||:|||||:|||||:|||.:||:|||||||
Zfish   130 GCDSPEKLRALLPRLEQDLKDSGKFKDFYQFTFNFAKNPGQKGLDLEMAVAYWNLVLAGRFKFLD 194

  Fly   200 IWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVEWCQ 253
            :|.:||.|.|||:|.:|||||||||...|.|.|||||.|||||||||||||:.:
Zfish   195 LWNRFLLEHHKRSIPKDTWNLLLDFGNMIADDMSNYDEEGAWPVLIDDFVEYAR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:304366 29/46 (63%)
Cullin_binding 141..252 CDD:281545 81/110 (74%)
dcun1d2aNP_991101.1 UBA_DCNL2 2..48 CDD:270595 29/46 (63%)
Cullin_binding 136..246 CDD:397562 80/109 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575954
Domainoid 1 1.000 183 1.000 Domainoid score I3364
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 334 1.000 Inparanoid score I2394
OMA 1 1.010 - - QHG53724
OrthoDB 1 1.010 - - D1418097at2759
OrthoFinder 1 1.000 - - FOG0000501
OrthoInspector 1 1.000 - - otm25104
orthoMCL 1 0.900 - - OOG6_102228
Panther 1 1.100 - - LDO PTHR12281
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2084
SonicParanoid 1 1.000 - - X1511
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.900

Return to query results.
Submit another query.