DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO and dcn-1

DIOPT Version :9

Sequence 1:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_497866.2 Gene:dcn-1 / 175556 WormBaseID:WBGene00010428 Length:295 Species:Caenorhabditis elegans


Alignment Length:306 Identity:105/306 - (34%)
Similarity:153/306 - (50%) Gaps:40/306 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 INKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYY-----YRELDRKR 69
            :|:|||. .:.|:::|:..|...|..::..|.:.:|..|.|...||.||..:     ...:||..
 Worm     1 MNRLKSD-QKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDNPNLFAGSTPQPSVDRSN 64

  Fly    70 IEQLFMRYRDPSDPL---KIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGM 131
            ||:||.:|.||.|.:   ::|..|:...|.||..:...:.||::||||.|:.|||||.||::.||
 Worm    65 IERLFNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCEFSLDEWVKGM 129

  Fly   132 CDLGIDSIDKLKTKLPILEQEL-NDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRF 195
            ..|..|::..|:.::..:...| :|..||.:.|.|.|||||....:.:|||.||..|.::...|.
 Worm   130 TALQADTVQNLRQRIDSINSGLESDKAKFHELYLFAFNYAKSAACRNLDLETAICCWDVLFGQRS 194

  Fly   196 KFLDIWCQFLEEKHKRA--------------------ISRDTWNLLLDFATNIDDRMSNYDSEGA 240
            ..:..|..||..:...|                    ||||||||..||.......:|:||.|||
 Worm   195 TIMTQWIDFLWAQENAAASRLAQNVGASNAKQFKSVWISRDTWNLFWDFILLSKPDLSDYDDEGA 259

  Fly   241 WPVLIDDFVEWCQENDHLKEDSSPASGYQQQSSASSSSQKNISSAY 286
            ||||||.||::|:||          ..|.:..:||:..|....|.|
 Worm   260 WPVLIDQFVDYCREN----------LNYPKPGNASNDQQMETPSYY 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:304366 14/46 (30%)
Cullin_binding 141..252 CDD:281545 47/131 (36%)
dcn-1NP_497866.2 UBA_DCNL 7..48 CDD:270535 10/41 (24%)
Cullin_binding 140..271 CDD:281545 47/130 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167557
Domainoid 1 1.000 83 1.000 Domainoid score I5335
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I2649
Isobase 1 0.950 - 0 Normalized mean entropy S1522
OMA 1 1.010 - - QHG53724
OrthoDB 1 1.010 - - D1418097at2759
OrthoFinder 1 1.000 - - FOG0000501
OrthoInspector 1 1.000 - - oto20758
orthoMCL 1 0.900 - - OOG6_102228
Panther 1 1.100 - - LDO PTHR12281
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2084
SonicParanoid 1 1.000 - - X1511
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.890

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