DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO and Dcun1d1

DIOPT Version :9

Sequence 1:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001192290.1 Gene:Dcun1d1 / 114893 MGIID:2150386 Length:259 Species:Mus musculus


Alignment Length:249 Identity:157/249 - (63%)
Similarity:198/249 - (79%) Gaps:6/249 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 INKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRE-----LDRKR 69
            :|||||| .:|||::|:..|.:.|:||:.||.|||||.::|:||:|||||.|.||     ||||:
Mouse     1 MNKLKSS-QKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKK 64

  Fly    70 IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDL 134
            :|||:.||:||.|..|||..|:..|.:||.|.|.|..||||||||.|..|||||:.||::||.:|
Mouse    65 LEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTEL 129

  Fly   135 GIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRFKFLD 199
            |.|||:|||.::|.:||||.:.|:|||||.||||:||:|||||:|||||||||.:||:|||||||
Mouse   130 GCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLD 194

  Fly   200 IWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVEWCQ 253
            :|.:||.|.|||:|.:|||||||||::.|.|.|||||.|||||||||||||:.:
Mouse   195 LWNKFLLEHHKRSIPKDTWNLLLDFSSMIADDMSNYDEEGAWPVLIDDFVEFAR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:304366 26/46 (57%)
Cullin_binding 141..252 CDD:281545 80/110 (73%)
Dcun1d1NP_001192290.1 UBA_DCNL1 1..51 CDD:270594 29/50 (58%)
Cullin_binding 136..246 CDD:397562 79/109 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833254
Domainoid 1 1.000 178 1.000 Domainoid score I3535
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10773
Inparanoid 1 1.050 332 1.000 Inparanoid score I2408
Isobase 1 0.950 - 0 Normalized mean entropy S1522
OMA 1 1.010 - - QHG53724
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000501
OrthoInspector 1 1.000 - - otm43902
orthoMCL 1 0.900 - - OOG6_102228
Panther 1 1.100 - - O PTHR12281
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2084
SonicParanoid 1 1.000 - - X1511
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.880

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