DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCCRO and Dcun1d2

DIOPT Version :9

Sequence 1:NP_001246770.1 Gene:SCCRO / 39685 FlyBaseID:FBgn0036510 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001019675.2 Gene:Dcun1d2 / 102323 MGIID:2142792 Length:259 Species:Mus musculus


Alignment Length:249 Identity:149/249 - (59%)
Similarity:191/249 - (76%) Gaps:6/249 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 INKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRE-----LDRKR 69
            ::||||: .:|||::|::.|...|:|||:||.||:||.:.|:|::|||||.::||     :|:|:
Mouse     1 MHKLKSA-QKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSVDQKK 64

  Fly    70 IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDL 134
            :|||:.||:||.|..|||..|:..|.:||.|.|.|..||:|||||.|..|||||:.||::||.:|
Mouse    65 LEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKKEFVDGMTEL 129

  Fly   135 GIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCIVLSGRFKFLD 199
            |.||.::||..||.|||||.|..||||.|.|||.:||:|||||:|||||:|||.:||||||||||
Mouse   130 GCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVAYWKLVLSGRFKFLD 194

  Fly   200 IWCQFLEEKHKRAISRDTWNLLLDFATNIDDRMSNYDSEGAWPVLIDDFVEWCQ 253
            :|..||.|.|||:|.||||||||||...|.|.:||||.|||||||||||||:.:
Mouse   195 LWNTFLLEHHKRSIPRDTWNLLLDFGNMIADDLSNYDEEGAWPVLIDDFVEYAR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCCRONP_001246770.1 UBA_like_SF 11..58 CDD:304366 23/46 (50%)
Cullin_binding 141..252 CDD:281545 80/110 (73%)
Dcun1d2NP_001019675.2 UBA_like_SF 2..48 CDD:304366 23/46 (50%)
Cullin_binding 137..247 CDD:281545 80/109 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833256
Domainoid 1 1.000 178 1.000 Domainoid score I3535
eggNOG 1 0.900 - - E1_KOG3077
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 332 1.000 Inparanoid score I2408
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53724
OrthoDB 1 1.010 - - D1418097at2759
OrthoFinder 1 1.000 - - FOG0000501
OrthoInspector 1 1.000 - - otm43902
orthoMCL 1 0.900 - - OOG6_102228
Panther 1 1.100 - - LDO PTHR12281
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2084
SonicParanoid 1 1.000 - - X1511
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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