DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7739 and lnkn-1

DIOPT Version :10

Sequence 1:NP_648776.1 Gene:CG7739 / 39684 FlyBaseID:FBgn0036509 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001369829.1 Gene:lnkn-1 / 176253 WormBaseID:WBGene00014023 Length:599 Species:Caenorhabditis elegans


Alignment Length:658 Identity:190/658 - (28%)
Similarity:305/658 - (46%) Gaps:137/658 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLALGNLIHASNITDKVFADIKEGIVAAFGDFNSDELTDVFVIRDGMKRLQILFGHYTEPLL--- 72
            ::.|.||:..|...:|...|:. |.|.||||||:|..||:.|..:|...:     :|.|..|   
 Worm     7 IIWLINLVSGSLSLEKKAPDLL-GKVCAFGDFNADRNTDILVFANGTLTI-----NYQETKLLDV 65

  Fly    73 ----KLGPDCQYG------DKTIVSVIPGDFDGDALMDVLVNLKGKDEETYEVHINWGNTTELKC 127
                |..|...:.      :...|....|||:||:.:||||:::.||.|.|. |..|  |:|:: 
 Worm    66 LEASKFTPGTSFAISKPSLNADFVECSVGDFNGDSRLDVLVSIRDKDTEIYN-HTLW--TSEIE- 126

  Fly   128 SNKSLFTS------KGEVMALDFNRDMIIDLYGL----------DSAERRTFWIFNSSRLPPEAV 176
            ..|.:|..      :...||:|.:.|...|:.|.          .:.|.:...:.|..:      
 Worm   127 DEKEIFRPFHVAMLQQHAMAIDVSDDGWTDVLGFYPNGSMFCTGFNKEGKYNLLVNGCK------ 185

  Fly   177 HQAEPTEFKENLSI-PN-ANAYLDLNGDFLADLFLQTKSS-----YEIWHGINERDKQENFSYQY 234
            |  |...|.|.|:| |. .:.::|||.|.:||:...||.|     ..:|       ::...|:|:
 Worm   186 H--EFVAFPEKLNIYPGMPHLFVDLNSDLIADIVFMTKESDGSLFMSVW-------QKTKISWQF 241

  Fly   235 QIKFQPIGGNDY-YIGQAVFMDFELKGVQNIVVPFCILSNCRNSSIMVHDGTDFRNLHVNFRDPQ 298
            :.....:....| ::|..|.||.:..|..:|:||.|....|.               |:......
 Worm   242 RDWVPKLTPAQYPFVGAPVVMDVDSDGELDILVPICREDECS---------------HITQMASW 291

  Fly   299 GVT--WAFVP------PVSDDVYLRTITARSGDFNLDGYPDLLVTLQPLNVD-KPVMQTFLLENV 354
            ..|  |..|.      .|..:.:.|.| .|.|:|:||.:||::|..|....: :||::  :::|.
 Worm   292 SKTKLWGLVACDMQDYTVIKEPFSRVI-FRVGEFSLDSFPDMVVIAQATRANTRPVIK--VMDNA 353

  Fly   355 PCTTCNKPLKRTFEVRWNALSPMGNNTVA----GAFYDFYQDGVLDVILIRKDG----------- 404
            .||.|.|...|.||:|........|.::.    |.|:|..:||.||:::..:.|           
 Worm   354 ECTKCEKNGTRRFEIRAQENIQPKNMSLGVIKMGTFFDLLEDGSLDLLVEYEYGGQTRFGFIYCP 418

  Fly   405 -KGKYQPLAFRNTLDYDANFVKVIVLTGL-DNKQNPERRTPLGRKKRTYGT--NLPGPRITYSTT 465
             ||             |..|:||.|.||: .::.||        |....|:  ::.|...::|.|
 Worm   419 DKG-------------DTTFLKVQVFTGVCSDRCNP--------KSNEIGSSISMTGACASFSMT 462

  Fly   466 TQDGDQQCGSSVQLPQASYFALQLPYTCFGLGRTPNFVDQLTVGL---GSKLRNW----TQLIPN 523
            ...|......:.|:|.:|..||.||:..:||||:|||||:|.:.:   ..:..:|    .|::||
 Worm   463 DGWGGSTQSVACQVPASSNRALYLPFLLYGLGRSPNFVDELNIAIPKYADRKEDWKHSLKQIVPN 527

  Fly   524 SQIIVVPKPLNEPSHWKAQLFVTPSKLILMSVVALGGTCLVIVFIILVLYIKEKREDKQERLQES 588
            |:|||:| |.::..||.::|:||||.||:.|:..:...|.:::.:::.|:.:||:||:.||.|:|
 Worm   528 SRIIVLP-PSDQYPHWTSRLYVTPSALIVQSLAVIALVCCMLLMVVVFLHYREKKEDRYERQQQS 591

  Fly   589 HRFHFDAM 596
            ||||||||
 Worm   592 HRFHFDAM 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7739NP_648776.1 FG-GAP_3 41..103 CDD:433275 21/74 (28%)
lnkn-1NP_001369829.1 FG-GAP_3 36..106 CDD:433275 21/74 (28%)

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