DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGO2 and AGO2

DIOPT Version :9

Sequence 1:NP_730054.1 Gene:AGO2 / 39683 FlyBaseID:FBgn0087035 Length:1217 Species:Drosophila melanogaster
Sequence 2:NP_174413.2 Gene:AGO2 / 840016 AraportID:AT1G31280 Length:1014 Species:Arabidopsis thaliana


Alignment Length:1054 Identity:300/1054 - (28%)
Similarity:463/1054 - (43%) Gaps:183/1054 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 QEGGYQQRPPGQQQGGHQQGRQGQEG-GYQQRPPGQQQGGHEQGR-QGQEGGYQQRPSGQQQGGH 309
            :.|||        :||...|| |:.| ||     |...||.|||| :|..||.|.|..|.::|| 
plant     2 ERGGY--------RGGRGDGR-GRGGRGY-----GGGGGGGEQGRDRGYGGGEQGRGRGSERGG- 51

  Fly   310 QQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQ----------QQGGHQQGRQGQEG 364
              |.:||..|.||....|.|.|...|..|:.....|:|..|          ...|...|..|: |
plant    52 --GNRGQGRGEQQDFRSQSQRGPPPGHGGRGTTQFQQPRPQVAPQPSQAPASYAGSVGGVAGR-G 113

  Fly   365 GYQQRPPGQQPNQTQSQGQYQSRGPPQQQQAAPLPLPP--QPAGSIKRGTIGKPGQVG------- 420
            .:.::|  |.|:.:.|.....:......:.|..:.|.|  |.|.|.::..:.:|.:.|       
plant   114 AWGRKP--QVPSDSASPSTSTTVVSEPVRVAEVMNLKPSVQVATSDRKEPMKRPDRGGVVAVRRV 176

  Fly   421 ---INYLDLDLSKMPSVAYHYDVKIMPERP-KKFYRQAFEQFRV---------DQLGGAVLAYDG 472
               :|:..::.:. .||..||||:|..|.| ||..|  ||...|         |:...|:.||||
plant   177 NLYVNHYKVNFNP-ESVIRHYDVEIKGEIPTKKVSR--FELAMVRDKVFTDNPDEFPLAMTAYDG 238

  Fly   473 KASCYSVDKLPLNSQNPEVTVTDR-NGRTLRYTIEIKETGDSTIDLKSLTTYMNDRIFDKPMRAM 536
            :.:.:|..:||..|...|...|:. .||:  ||..||:.  :.:.|..|..||..|....|...:
plant   239 QKNIFSAVELPTGSYKVEYPKTEEMRGRS--YTFTIKQV--NVLKLGDLKEYMTGRSSFNPRDVL 299

  Fly   537 QCVEVVLASPCHNKAIRVGRSFF-KMSDPNN------------RHELDDGYEALVGLYQAFMLGD 588
            |.::||:........|.||:||| :.::|:.            ||.|....:.|           
plant   300 QGMDVVMKEHPSKCMITVGKSFFTRETEPDEDFRFGVIAAKGYRHTLKPTAQGL----------- 353

  Fly   589 RPFLNVDISHKSFPISMPMIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVVYTPPQSFQSA 653
              .|.:|.|..:|..:|.:|||     ||...|.:....:.||.:|..|.|:.|.....::.|..
plant   354 --SLCLDYSVLAFRKAMSVIEY-----LKLYFNWSDMRQFRRRDVEEELIGLKVTVNHRKNKQKL 411

  Fly   654 PRVYRVNGLSRAPASSETF---EHDG----KKVTIASYF---HSRNYPLKFPQLHCLNVGSSIKS 708
            ..|    |||........|   :.:|    :|.:|..||   :.|:...|  .:.||::|.:.:.
plant   412 TIV----GLSMQNTKDIKFDLIDQEGNEPPRKTSIVEYFRIKYGRHIVHK--DIPCLDLGKNGRQ 470

  Fly   709 ILLPIELCSIEEGQALNRKDGATQVANMIKYAATSTNVRKRKIMNLLQYFQHNLD--------PT 765
            ..:|:|.|.:.||| :..||      |:.|.:|..  ::|..::| .|..|.|:|        |:
plant   471 NFVPMEFCDLVEGQ-IYPKD------NLDKDSALW--LKKLSLVN-PQQRQRNIDKMIKARNGPS 525

  Fly   766 ----ISRFGIRIANDFIVVSTRVLSPPQVEYHSKRFTMVKNGSWRMDGMKFLEPKPKAHK----- 821
                |..||:::..:...|..|||..|.::. ::|..:|:.           ||.|:.:.     
plant   526 GGEIIGNFGLKVDTNMTPVEGRVLKAPSLKL-AERGRVVRE-----------EPNPRQNNQWNLM 578

  Fly   822 ------------CAVLYCDPRSGRKMNYTQLNDFGNLIISQGKAVNISLDSDVTYRPFTDDERSL 874
                        .|||  |..:..:.| ...|||.:.:|.:...:.:.:::.:.|:....:..|.
plant   579 KKGVTRGSIVKHWAVL--DFTASERFN-KMPNDFVDNLIDRCWRLGMQMEAPIVYKTSRMETLSN 640

  Fly   875 DTIFADLKRSQHDLA----------IVIIPQFR--ISYDTIKQKAELQHGILTQCIKQFTVERKC 927
            .....:|.||..|.|          :|:....|  ..|.|:|..||.:.|::|||...... .|.
plant   641 GNAIEELLRSVIDEASRKHGGARPTLVLCAMSRKDDGYKTLKWIAETKLGLVTQCFLTGPA-TKG 704

  Fly   928 NNQTIGNILLKINSKLNGINHKIKDDPRLPMMK---NTMYIGADVTHPSPDQREIPSVVGVAASH 989
            .:|...|:.||:|:|:.|.|.::.|  .....|   ..|:|||||.||:...:..||:|.|..:.
plant   705 GDQYRANLALKMNAKVGGSNVELMD--TFSFFKKEDEVMFIGADVNHPAARDKMSPSIVAVVGTL 767

  Fly   990 D-PYGASYNMQYRLQRGALEEIEDMFSITLEHLRVYKEYRNAYPDHIIYYRDGVSDGQFPKIKNE 1053
            : |....|..:...|....|||:......||.::.:.:.....|:.|:.:||||||.||..:.|.
plant   768 NWPEANRYAARVIAQPHRKEEIQGFGDACLELVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLNV 832

  Fly  1054 ELRCIKQACDKVGCKPKICCVIVVKRHHTRFFPSGDVTTSNKFNNVDPGTVVDRTIVHPNEMQFF 1118
            ||..:|...:|.|..|||..::..|||.|||||:.:...|:| .||..|||||..::||.|..|:
plant   833 ELLDVKLTFEKNGYNPKITVIVAQKRHQTRFFPATNNDGSDK-GNVPSGTVVDTKVIHPYEYDFY 896

  Fly  1119 MVSHQAIQGTAKPTRYNVIENTGNLDIDLLQQLTYNLCHMFPRCNRSVSYPAPAYLAHLVAARGR 1183
            :.||....||:|||.|..:.:......|.:|:|.:.:|..|.||.:.||...|.|.|.:||.|||
plant   897 LCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCFTFTRCTKPVSLVPPVYYADMVAFRGR 961

  Fly  1184 VYLTGTNRFLDLKK 1197
            :|...::|..:.|:
plant   962 MYHEASSREKNFKQ 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO2NP_730054.1 PLN03202 411..1180 CDD:215631 239/857 (28%)
ArgoN 411..543 CDD:293095 44/152 (29%)
ArgoL1 554..601 CDD:285861 13/59 (22%)
PAZ 605..719 CDD:239207 32/123 (26%)
Piwi_ago-like 764..1186 CDD:240015 137/458 (30%)
AGO2NP_174413.2 PLN03202 137..957 CDD:215631 252/907 (28%)
ArgoN 164..306 CDD:293095 45/162 (28%)
ArgoL1 317..366 CDD:285861 12/60 (20%)
PAZ 383..488 CDD:280352 30/114 (26%)
Piwi_ago-like 528..963 CDD:240015 136/458 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1041
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D159407at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22891
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

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