DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGO2 and AGO9

DIOPT Version :9

Sequence 1:NP_730054.1 Gene:AGO2 / 39683 FlyBaseID:FBgn0087035 Length:1217 Species:Drosophila melanogaster
Sequence 2:NP_197613.2 Gene:AGO9 / 832241 AraportID:AT5G21150 Length:896 Species:Arabidopsis thaliana


Alignment Length:869 Identity:220/869 - (25%)
Similarity:381/869 - (43%) Gaps:137/869 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 LPLPPQPAGSIKRGTIGKPGQVGINYLDLDLSKMPSVAYHYDVKIMPE--RP-------KKFYRQ 453
            ||: .:|.||   |:.|:...:..|:..:..:|.....:||.|.|..|  ||       :|...:
plant    35 LPM-ARPRGS---GSKGQKIPLLTNHFGVKFNKPSGYFFHYSVAINYEDGRPVEAKGIGRKILDK 95

  Fly   454 AFEQFRVDQLGGAVLAYDGKASCYSVDKLPLNSQNPEVTVTD---------------------RN 497
            ..|.::.| ||....||||:.:.::|..||.|..:..|.:.:                     |.
plant    96 VQETYQSD-LGAKYFAYDGEKTLFTVGALPSNKLDFSVVLEEIPSSRNHAGNDTNDADRKRSRRP 159

  Fly   498 GRTLRYTIEIKETGDSTIDLKSLTTYMNDRIFDKPMRAMQCVEVVL-ASPCHNKAIRVGRSFFKM 561
            .:|.::.:||...  :.|.::::.:.:..:..:....|::.::::| .|......:.|.:|||. 
plant   160 NQTKKFMVEISYA--AKIPMQAIASALQGKETENLQDALRVLDIILRQSAARQGCLLVRQSFFH- 221

  Fly   562 SDPNNRHELDDGYEALVGLYQAFMLGDRPF-LNVDISHKSFPISMPMIEYLERFSLKAKINNTTN 625
            :|..|...:..|.....|.:.:|....... ||:|.|........|::::|.....|   .:...
plant   222 NDVKNFVPIGGGVSGCRGFHSSFRTTQGGLSLNIDTSTTMIVQPGPVVDFLLANQNK---KDPYG 283

  Fly   626 LDYSRRFLEPFLRGINVVYTPPQSFQSAPRVYRVNGLSRAPASSETF---------EHDGKKVTI 681
            :|:::  ....|:.:.|..|      .:.|.|:::|||......:.|         |.:..::|:
plant   284 MDWNK--ARRVLKNLRVQIT------LSNREYKISGLSEHSCKDQLFTWRKPNDKGEFEEVEITV 340

  Fly   682 ASYFHSRN----YPLKFPQLHCLNVGSSIKSILLPIELCSIEEGQALNRKDGATQVANMIKYAAT 742
            .:|:..||    |...||   |:|||...:....|||.|::...|...:.....|.|.:::.:..
plant   341 LNYYKERNIEVRYSGDFP---CINVGKPKRPTYFPIEFCNLVSLQRYTKSLTNFQRAALVEKSRQ 402

  Fly   743 STNVRKRKIMNLLQYFQHNLDPTISRFGIRIANDFIVVSTRVLSPPQVEY-HSKRFTMVKNGSWR 806
            ....|...:...|:...:|.||.:...|:.|..:|..|..|:|..|.::. ..:..:.:| |.|.
plant   403 KPPERMASLTKGLKDSNYNADPVLQDSGVSIITNFTQVEGRILPTPMLKVGKGENLSPIK-GKWN 466

  Fly   807 MDGMKFLEPKPKAHKCAVLY---CDPRSGRKMNYTQLNDFGNLIISQGKAVNISLDSDVTYRPFT 868
            .......||........|.:   ||..       |.:.|    :|..|:...|:::.     ||.
plant   467 FMRKTLAEPTTVTRWAVVNFSARCDTN-------TLIRD----LIKCGREKGINVEP-----PFK 515

  Fly   869 D--DER----------SLDTIFADLKRS--QHDLAIVIIPQFRISYDTI---KQKAELQHGILTQ 916
            |  :|.          .::.:|..:|..  :..|.::.|...|.:.|..   |:|..:..||:||
plant   516 DVINENPQFRNAPATVRVENMFEQIKSKLPKPPLFLLCILAERKNSDVYGPWKKKNLVDLGIVTQ 580

  Fly   917 CIKQFTVERKCNNQTIGNILLKINSKLNGINH--KIKDDPRLPMMKN--TMYIGADVTHPSPDQR 977
            ||    ...:.|:|.:.|:|||||:||.|:|.  .::..|.:|.:..  |:.:|.||:|.||.|.
plant   581 CI----APTRLNDQYLTNVLLKINAKLGGLNSLLAMERSPAMPKVTQVPTIIVGMDVSHGSPGQS 641

  Fly   978 EIPSVVGVAASHD-PYGASYNMQYRLQRGALEEIEDMF------------SITLEHLRVYKEYRN 1029
            :|||:..|.:|.. |..:.|....|.|...:|.|:::|            .:.|:   .|....|
plant   642 DIPSIAAVVSSRQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEGMFRELLLD---FYYSSEN 703

  Fly  1030 AYPDHIIYYRDGVSDGQFPKIKNEELRCIKQACDKVG--CKPKICCVIVVKRHHTRFFPSGDVTT 1092
            ..|:|||.:|||||:.||.::.|.||..:.|||..:.  ..||...::..|.|||:||.|...  
plant   704 RKPEHIIIFRDGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGP-- 766

  Fly  1093 SNKFNNVDPGTVVDRTIVHPNEMQFFMVSHQAIQGTAKPTRYNVIENTGNLDIDLLQQLTYNLCH 1157
                :||.|||::|..|.||....|::.:|..:.||.:||.|:|:.:......|.||:|.::|.:
plant   767 ----DNVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQELVHSLSY 827

  Fly  1158 MFPRCNRSVSYPAPAYLAHLVAAR 1181
            ::.|...::|..||...|||.||:
plant   828 VYQRSTTAISVVAPVCYAHLAAAQ 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO2NP_730054.1 PLN03202 411..1180 CDD:215631 213/853 (25%)
ArgoN 411..543 CDD:293095 31/161 (19%)
ArgoL1 554..601 CDD:285861 13/47 (28%)
PAZ 605..719 CDD:239207 29/126 (23%)
Piwi_ago-like 764..1186 CDD:240015 133/458 (29%)
AGO9NP_197613.2 PLN03202 17..896 CDD:215631 220/869 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1041
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D159407at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22891
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

Return to query results.
Submit another query.