DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO2 and AT5G21030

DIOPT Version :10

Sequence 1:NP_730054.1 Gene:AGO2 / 39683 FlyBaseID:FBgn0087035 Length:1217 Species:Drosophila melanogaster
Sequence 2:NP_001331316.1 Gene:AT5G21030 / 832227 AraportID:AT5G21030 Length:854 Species:Arabidopsis thaliana


Alignment Length:915 Identity:230/915 - (25%)
Similarity:366/915 - (40%) Gaps:206/915 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 PPQQQQAAPLPLPPQPAGSIKRGTIGKPGQ---VGINYLDLDLSKMPS-VAYHYDVKI-----MP 444
            |||..:..||..........:||. |..||   :..|:..::..|..| ..:||.|.|     .|
plant     7 PPQHMEREPLKSKSSLLPMTRRGN-GSKGQKILLLTNHFRVNFRKPNSHNFFHYSVTITYEDGSP 70

  Fly   445 ERPKKFYRQAFEQFRVDQ-----LGGAVLAYDGKASCYSVDKLPLNSQNPEVTVTDRNGRTLRYT 504
            ...|.|.|:..|  :|.|     ||....||||..:.|:|..||.:|.:..|.:.         |
plant    71 LLAKGFGRKILE--KVQQTCQADLGCKHFAYDGDKNLYTVGPLPRSSLDFSVVLE---------T 124

  Fly   505 IEIKETGDSTIDLKSLTTYMNDRIFDKP-----------------------MRAMQCVEVVLASP 546
            ...:...|..:.|...:...|..|...|                       :|.|.|  ::..:.
plant   125 APSRRNADKRLKLPHQSKKFNVAILFAPPEIPMEAIANALQGKKTKHLLDAIRVMDC--ILSQNA 187

  Fly   547 CHNKAIRVGRSFFKMSDPNNRHELDDGYEALVGLYQAFMLGDRPF-LNVDISHKSFPISMPMIEY 610
            .....:.|.:|||. :|......:.:|.:...|.:.:|....... ||:|:|........|::::
plant   188 ARQGCLLVRQSFFH-NDAKYFANIGEGVDCCKGFHSSFRTTQGGLSLNIDVSTAMIVKPGPVVDF 251

  Fly   611 L-------ERFSLK-AKINNTTNLDYSRRFLEPFLRGINVVYTPPQSFQSAPRVYRVNGLSRAPA 667
            |       :.||:. .|..||             |:.:.|...|      :.:.|::.|||....
plant   252 LIANQGVNDPFSINWKKAKNT-------------LKNLRVKVLP------SNQEYKITGLSGLHC 297

  Fly   668 SSETF---------EHDGKKVTIASYF-HSRNYPLKFP-QLHCLNVGSSIKSILLPIELCSIEEG 721
            ..:||         |.:..::|::.|| ..|...|::. .|.|:|||...:....|||||.:...
plant   298 KDQTFTWKKRNQNREFEEVEITVSDYFTRIREIELRYSGGLPCINVGKPNRPTYFPIELCELVSL 362

  Fly   722 QALNRKDGATQVANMIKYAATSTNVRKRKIMNLLQYFQHNLDPTISRFGIRIANDFIVVSTRVLS 786
            |...:.....|.:|:||.:..:...|...:...|:...:|.||.:...|:||.:||..|..|||.
plant   363 QRYTKALTKFQRSNLIKESRQNPQQRIGVLTRALKTSNYNDDPMLQECGVRIGSDFTQVEGRVLP 427

  Fly   787 PPQVEYHSKRFTMVKNGSWRMDGMKFLEPKPKAHKCAVLY---CDPRSGRKMNYTQLNDFGNLII 848
            .|:::...::.....||||......|.:|........|.:   |||:.               ||
plant   428 TPKLKAGKEQDIYPINGSWNFKNKTFFKPATVTRWAVVNFSARCDPQK---------------II 477

  Fly   849 SQ----GKAVNISLDSDVTYRPFTDDERSLDTIFADLKRSQHDLAIVIIPQFRISYDTIKQKAEL 909
            ..    ||...|::||     |:       ..:|.:            .|||:.:..:::.....
plant   478 DDLTRCGKMKGINVDS-----PY-------HVVFEE------------NPQFKDATGSVRVDKMF 518

  Fly   910 QH--GILTQCIKQFTV-----------ERKC--------------NNQTIGNILLKINSKLNGIN 947
            ||  .||.:...:|.:           |:.|              |:|.:.|:|||||:||.|:|
plant   519 QHLQSILGEVPPKFLLCILEKKNSDVYEKSCSMWNCECIVPPQNLNDQYLTNLLLKINAKLGGLN 583

  Fly   948 H----KIKDDPRLPMMKNTMYIGADVTHPSPDQRE-IPSVVGVAASHD-PYGASYNMQYRLQRGA 1006
            .    ::.....|.|...|:.||.||:|.||.|.: |||:..|.:|.: |..:.|....|.|...
plant   584 SVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQSDHIPSIAAVVSSREWPLISKYRACVRTQSPK 648

  Fly  1007 LEEIEDMF---------SITLEHLRVYKEYRNAYPDHIIYYRDGVSDGQFPKIKNEELRCIKQAC 1062
            :|.|:.:|         .|..|.|..:.......|:|||.:|||||:.||.::.|.||..:.|. 
plant   649 VEMIDSLFKPVSDKDDQGIMRELLLDFHSSSGKKPNHIIIFRDGVSESQFNQVLNIELDQMMQI- 712

  Fly  1063 DKVGCKPKICCVIVVKRHHTRFFPSGDVTTSNKFNNVDPGTVVDRTIVHPNEMQFFMVSHQAIQG 1127
                            .|||:||      .:...|||.|||::|..|.|.:...|::.:|....|
plant   713 ----------------NHHTKFF------QTESPNNVLPGTIIDSNICHQHNNDFYLCAHAGKIG 755

  Fly  1128 TAKPTRYNVIENTGNLDIDLLQQLTYNLCHMFPRCNRSVSYPAPAYLAHLVAARGRVYLTGTNRF 1192
            |.:||.|:|:.:....|.|.||:|.::|.:::.|...::|..||...|||.||:    :....:|
plant   756 TTRPTHYHVLYDEIGFDTDQLQELVHSLSYVYQRSTTAISLVAPICYAHLAAAQ----MATAMKF 816

  Fly  1193 LDLKK 1197
            .|:.:
plant   817 EDMSE 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO2NP_730054.1 ArgoN 471..543 CDD:465134 17/94 (18%)
ArgoL1 554..601 CDD:462567 12/47 (26%)
PAZ 605..719 CDD:239207 32/132 (24%)
Piwi_ago-like 764..1186 CDD:240015 130/470 (28%)
AT5G21030NP_001331316.1 PLN03202 1..854 CDD:215631 230/915 (25%)

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