DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO2 and piwil2

DIOPT Version :10

Sequence 1:NP_730054.1 Gene:AGO2 / 39683 FlyBaseID:FBgn0087035 Length:1217 Species:Drosophila melanogaster
Sequence 2:NP_001352553.2 Gene:piwil2 / 572134 ZFINID:ZDB-GENE-060526-345 Length:1046 Species:Danio rerio


Alignment Length:1180 Identity:263/1180 - (22%)
Similarity:426/1180 - (36%) Gaps:315/1180 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PPGQQQGGHQQGRQGQEGGYQQRPSGQQQG-------------------GHQQGRQGQEGGYQQR 208
            |||..:...||..:.|.....|...|:.:|                   |....|.|:  |..|.
Zfish    11 PPGVIRAPWQQSTEDQSQLLDQPSLGRARGLIMPIDEPLPGRGRAFSVLGEMPVRFGR--GITQS 73

  Fly   209 PPGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQG---- 269
            ...:...|..:|        .:.|  .::||..:||     |:....|....|..:....|    
Zfish    74 IAAEPLVGMARG--------VRLP--MEEGGFGRGR-----GFLLPTPEPTVGIGRGAAIGPVPT 123

  Fly   270 ---QEGGYQQRPPG-QQQGGHEQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQG 330
               |:...:::.|. |.:......:.|..|......|..:..|.:.|:....|.   .|.|    
Zfish   124 LDIQKAEVEEKMPELQAEVAPTVAKVGSPGTGSSLVSMFRGLGIEPGKTWGRGA---APVG---- 181

  Fly   331 GHQQGRQGQEGG-YQQRPS--GQQQGGHQQGRQGQEG------GYQQRPPGQQPNQTQSQGQYQS 386
               :|..|..|. .|.:|:  |......::..:.:|.      |:........|:.|..:|..  
Zfish   182 ---RGAAGDMGADLQPKPTIIGASLTPEREEVRSEESISFLGRGFTGFGRAAMPHMTVGRGPI-- 241

  Fly   387 RGP--PQQQQAAPLPL----------------PPQPAGSI--------KRGTIGKPGQVGINYLD 425
             ||  |....|||..|                ||:....|        |.||.|.|..:|.||:.
Zfish   242 -GPLSPSPSVAAPFSLISASSSSEDAPVAPGTPPKVEVKIETVKEPLQKIGTKGSPIPIGSNYIP 305

  Fly   426 LDLSKMPSVAYHYDVKIMPERPKKFYRQAFEQFRVDQLG-------------GAVLAYDGKASCY 477
            :....  ...:.|.|...|              .|:.|.             |.|:|:||     
Zfish   306 ICCKN--DAVFQYHVTFTP--------------NVESLSMRFGMMKEHRPTTGEVVAFDG----- 349

  Fly   478 SVDKLPLNSQNPEVTVTDRNGRTLRYTIEIK---ETGDSTIDLK-SLTTYMNDRIFDKPMRAMQC 538
            |:..||               :.|...:.:|   :|.:..||:| .||..:       |..:..|
Zfish   350 SILYLP---------------KRLEEVVHLKAERKTDNQEIDIKIQLTKIL-------PPSSDLC 392

  Fly   539 VEVVLASPCHNKAIR----------VGRSFFKMSDPN-----NRHELD--DGYEALV-----GLY 581
            :      |.:|..:|          |||:.:   |||     .:|.|.  .||...:     |||
Zfish   393 I------PFYNVVLRRVMKILGLKLVGRNHY---DPNAVVILGKHRLQVWPGYSTSIKHTDGGLY 448

  Fly   582 QAFMLGDRPFLNVDISHKSFPISMPMIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVVYT- 645
                      |.||:|||                   .:.|.:.||.           :|::|. 
Zfish   449 ----------LVVDVSHK-------------------VLRNDSVLDV-----------MNLIYQG 473

  Fly   646 PPQSFQSA---------------PRVYRVNGLSRAPASSETFE-HDGKKVTIASYFHSRNYPLKF 694
            ..:|||..               .|.||::.:..:.:..:||. .||...|...|:. :||.:..
Zfish   474 SRESFQDECTKEFVGSIVITRYNNRTYRIDDIEWSKSPKDTFTLADGSVTTFVDYYR-KNYGITI 537

  Fly   695 PQL----------HCLNVGSSI---KSILLPIELCSIEEGQALNRKDGATQVANMIKYAATSTNV 746
            .:|          .....|..:   :.:||| ||..:.......|||     ...:|......||
Zfish   538 KELDQPLLIHRPKERSRPGGKVITGEILLLP-ELSFMTGIPEKMRKD-----FRAMKDLTMHINV 596

  Fly   747 RKRKIMNLLQYFQHNLDPT------ISRFGIRIANDFIVVSTRVLSPPQVEYHSKRFTMVKNGSW 805
            ..::....|:...||::..      :.|:|:.|:.:.:|...|.|....:..||..|.......|
Zfish   597 GAQQHTQSLKQLLHNINSNNEALSELGRWGLSISQEILVTQGRTLPSETICLHSASFVTSPAVDW 661

  Fly   806 RMDGMKFLEPKPKAHKC-AVLYCDPRSGRKMNYTQLNDFGNLIISQG----KAVNISLDSDVT-- 863
            ..:.::..........| ||.|  ||.........:..|..:....|    :.:.:.|..|.|  
Zfish   662 SRELVRDPSISTVPLNCWAVFY--PRRATDQAEELVTTFSRVAGPMGMRVERPIRVELRDDRTET 724

  Fly   864 -----YRPFTDDERSLDTIFADLKRSQHDLAIVIIPQFRISYDTIKQKAELQHGILTQCIKQFTV 923
                 :...|.:.| :..:...:..::.||           |..||:...:|..:.:|.|...|:
Zfish   725 FVKSIHSQLTSEPR-VQLVVCIMTGNRDDL-----------YSAIKKLCCIQSPVPSQAINVRTI 777

  Fly   924 ERKCNNQTIG-NILLKINSKLNG----INHKIKDDPRLPMMKNTMYIGADVTHPSPDQREIPSVV 983
            .:....:::. .|||:||.||.|    :|        :| :|..|.||.||.|.:  .::..||:
Zfish   778 SQPQKLRSVAQKILLQINCKLGGELWTVN--------VP-LKYLMVIGVDVHHDT--SKKSRSVM 831

  Fly   984 GVAASHDPYGASYNMQYRLQRGALEEIEDMFSI-TLEHLRVYKEYRNAYPDHIIYYRDGVSDGQF 1047
            |..||.:.....:..:...|. ..|||.:.|.: .|..|:.|.|..:|:|:.|:.|||||||||.
Zfish   832 GFVASLNSMLTKWYSRVTFQM-PNEEIINGFRVCLLAALQKYYEVNHAFPEKIVIYRDGVSDGQL 895

  Fly  1048 PKIKNEELRCIKQACDKV-GCKPKICCVIVVKRHHTRFFPSGDVTTSNKFNNVDPGTVVDRTIVH 1111
            ..:::.|:..|.:..:.: ..:||:..::|.||..|..:..|    |:.|....||||:|.|:.:
Zfish   896 KTVEHYEIPQILKCFETIPNYEPKLAFIVVQKRISTTLYSYG----SDHFGTPSPGTVLDHTVTN 956

  Fly  1112 PNEMQFFMVSHQAIQGTAKPTRYNVIENTGNLDIDLLQQLTYNLCHMFPRCNRSVSYPAPAYLAH 1176
            .:.:.|::::|...||...||.|..:.||.||..|.||:||:.:||::.....::..|||...||
Zfish   957 RDWVDFYLMAHSIRQGCGLPTHYITVYNTANLTPDHLQRLTFKMCHLYWNWPGTIRVPAPCKYAH 1021

  Fly  1177 LVAARGRVYL 1186
            .:|.....||
Zfish  1022 KLAFLSGQYL 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO2NP_730054.1 ArgoN 471..543 CDD:465134 15/75 (20%)
ArgoL1 554..601 CDD:462567 19/58 (33%)
PAZ 605..719 CDD:239207 26/143 (18%)
Piwi_ago-like 764..1186 CDD:240015 116/446 (26%)
piwil2NP_001352553.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35 7/23 (30%)

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