Sequence 1: | NP_730054.1 | Gene: | AGO2 / 39683 | FlyBaseID: | FBgn0087035 | Length: | 1217 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006238924.1 | Gene: | Ago4 / 298533 | RGDID: | 1304583 | Length: | 861 | Species: | Rattus norvegicus |
Alignment Length: | 847 | Identity: | 272/847 - (32%) |
---|---|---|---|
Similarity: | 414/847 - (48%) | Gaps: | 82/847 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 388 GPPQQQQAAPLPLPPQPAGSIKRGTIGKPGQVGINYLDLDLSKMPSVAYHYDVKIMPE-RPKKFY 451
Fly 452 RQAFE----QFRVDQLGGAVLAYDGKASCYSVDKLPLNSQNPEVTVT-DRNGRTLRYTIEIKETG 511
Fly 512 DSTIDLKSLTTYMNDRIFDKPMRAMQCVEVVLASPCHNKAIR---VGRSFFKMSDPNN-RHELDD 572
Fly 573 GYEALVGLYQAFMLGDRP-----FLNVDISHKSFPISMPMIEYLERFSLKAKINNTTN--LDYSR 630
Fly 631 RFLEPFLRGINVVYTPPQSFQSAPRVYRVNGLSRAPASSETFE---HDGK--KVTIASYFHSR-N 689
Fly 690 YPLKFPQLHCLNVGSSIKSILLPIELCSIEEGQALNRKDGATQVANMIKYAATSTNVRKRKIMNL 754
Fly 755 LQYFQHNL----DPTISRFGIRIANDFIVVSTRVLSPPQVEYHSKRFTMV--KNGSWRMDGMKF- 812
Fly 813 --LEPKPKAHKCAVLYCDPRSGRKMNYTQLNDFGNLIISQGKAVNISLDSDVTYRPFTDDERSLD 875
Fly 876 TIFADLKRSQ--HDLAIVIIPQFRISYDTIKQKAELQHGILTQCIKQFTVERKCNNQTIGNILLK 938
Fly 939 INSKLNGINHKIKDDPRLPMMKN-TMYIGADVTHPSPDQREIPSVVGVAASHDPYGASYNMQYRL 1002
Fly 1003 QRG----------ALEEIEDMFSITLEHL-RVYKEYRNAYPDHIIYYRDGVSDGQFPKIKNEELR 1056
Fly 1057 CIKQACDKV--GCKPKICCVIVVKRHHTRFFPSGDVTTSNKFNNVDPGTVVDRTIVHPNEMQFFM 1119
Fly 1120 VSHQAIQGTAKPTRYNVIENTGNLDIDLLQQLTYNLCHMFPRCNRSVSYPAPAYLAHLVAARGRV 1184
Fly 1185 YL 1186 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
AGO2 | NP_730054.1 | PLN03202 | 411..1180 | CDD:215631 | 260/816 (32%) |
ArgoN | 411..543 | CDD:293095 | 36/137 (26%) | ||
ArgoL1 | 554..601 | CDD:285861 | 20/52 (38%) | ||
PAZ | 605..719 | CDD:239207 | 40/121 (33%) | ||
Piwi_ago-like | 764..1186 | CDD:240015 | 150/442 (34%) | ||
Ago4 | XP_006238924.1 | PLN03202 | 15..860 | CDD:215631 | 267/834 (32%) |
ArgoN | 18..155 | CDD:293095 | 36/143 (25%) | ||
ArgoL1 | 167..216 | CDD:285861 | 21/54 (39%) | ||
PAZ_argonaute_like | 217..337 | CDD:239212 | 40/122 (33%) | ||
Piwi_ago-like | 384..819 | CDD:240015 | 150/442 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG58336 | |
OrthoDB | 1 | 1.010 | - | - | D159407at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000468 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR22891 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.030 |