DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO2 and sago-1

DIOPT Version :10

Sequence 1:NP_730054.1 Gene:AGO2 / 39683 FlyBaseID:FBgn0087035 Length:1217 Species:Drosophila melanogaster
Sequence 2:NP_504610.1 Gene:sago-1 / 179016 WormBaseID:WBGene00019666 Length:881 Species:Caenorhabditis elegans


Alignment Length:923 Identity:219/923 - (23%)
Similarity:363/923 - (39%) Gaps:213/923 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 APLPLPPQPAGSIKRGTI---GKPGQVGINYLDLDLSKMPSVAYHYDVKIM-------------- 443
            ||||:..||....|...:   |.|.|:..|...::|.|..|: :.|.|:::              
 Worm    20 APLPVGHQPLAEKKPKEVNQEGTPVQIVTNMRKINLEKNHSI-FKYSVQVLFVYQKSDGTELVLE 83

  Fly   444 ----------PERPK----KFYRQAFEQFRVDQLGGAVLAYDGKASCYSVDKLPLNSQNPEVTVT 494
                      .||.|    :.||:|.:|.:..:.||. ..||.:...||..||..:..:..:|.:
 Worm    84 KSKSVGSGCDHERSKSHCLRVYRKAAKQCQELKSGGP-FCYDSQGCLYSFSKLKNDEFSTNITGS 147

  Fly   495 D--RNGRTLRYTIEIKETGDSTIDLKSLTTYMNDRIFDKP-------MRAMQCVEVVLASPC-HN 549
            |  .|.:.||...::.:..:|   .::.|..:...:..:|       :.||.  ::|..:|. |.
 Worm   148 DISNNPKFLRVEFKLAKVQES---FQTTTNDVAKSVNCRPALQEKTILEAMN--QIVSTAPINHP 207

  Fly   550 KAIRVGRSFFKMSDPNNRHELD-------DGYEALVG----------------LYQAFMLGDRPF 591
            ..:.:|.....:.|..|   :|       .|..:.||                ||.|..|....|
 Worm   208 NVLTIGNCVHYLYDDTN---IDIRSITGEGGKSSAVGASKSVRTLEGTGKTPCLYMATELKTTLF 269

  Fly   592 -------LNVDISHKSFPISMPMIEYLERFSLKAKINNTTNLDYSRRFLEPF-LRGINV-----V 643
                   |.|.:.::.|           ..||||.              .|| |:..|.     .
 Worm   270 HPDNCSLLKVFMDYRGF-----------NGSLKAN--------------SPFVLKNKNAFIGLWC 309

  Fly   644 YTPP---QSFQSAPRVYRVN--GLSRAPASSETFEHDGKKVTIASYFHSR-NYPLKFPQLHCLNV 702
            ||..   ..::....:.::.  |||   |...|||.|.||:::.:||..: |..||:|.|..:..
 Worm   310 YTTHGKCSDWKDDRPMIKIKDFGLS---AKETTFERDNKKISVFNYFQVKYNMTLKYPDLFTVVA 371

  Fly   703 -GSSIKSILLPIELCSIEEGQALNRKD-GATQVANMIKYAATSTNVRKRKIMNLLQYFQHNLDPT 765
             |...|:..:|:|...:...|.:..:. ..|:.|::||.||...:.|| ||          .|..
 Worm   372 RGKDGKNQHIPVECLDLCNSQTVRTEQMVGTEQADLIKLAAAKPHDRK-KI----------TDTV 425

  Fly   766 ISRFGIRIANDFIV-------VSTRVLSPPQVEYHSKRFTMVKNGSWR-----------MDGMKF 812
            ::..|:......|:       |:..||..|.:     .|:..|...|.           |....|
 Worm   426 VNSIGLASEPKGIISVGAPESVTGLVLPKPDI-----YFSGGKKVFWNDPKKRGPATDFMPAGTF 485

  Fly   813 LEPKPKAHKCAVLYCDPRSGRKMNYTQLNDFGNLIISQGKAVNISLDS---DVTYRPFTDDERSL 874
            ::| .|.....|::        .|..||.|....:.|..:.:.:.:.:   .:..|.:      |
 Worm   486 IKP-TKLTNWEVVF--------DNGVQLVDCIQHLTSTMRQLGMEVSNPTVSLINRGY------L 535

  Fly   875 DTIFADLKRSQHDLAIVIIPQFRISYDTIKQKAELQHGILTQCIKQFTVERKCNNQ-TIGNILLK 938
            .:||.:.|.:...| |:.|.:...:|.|..:..|.:..:|||.|:..|..:....| |..||:.|
 Worm   536 RSIFENAKAANRQL-IMFITKSMNNYHTEIKCLEQEFDLLTQDIRFETAVKLAQQQNTRKNIIYK 599

  Fly   939 INSKLNGINHKIKDDPRLPMMKNT--MYIGADVTHPSPDQR----EIPSVVGVAASHDPYGASYN 997
            .|.||.|:|:::    |..:..|:  :.||.:.:     ||    :.|..:|.||:...:...:.
 Worm   600 TNMKLGGLNYEL----RSGVFSNSKRLIIGFETS-----QRGGLGDAPIAIGFAANMMSHSQQFA 655

  Fly   998 MQYRLQRGALEEIEDMF-SITLEHLRVYKEYR-NAYPDHIIYYRDGVSDGQFPKIKNEELRCIKQ 1060
            ..|...:.:.:....:. .|.|..|:..|..| |..||.::.|..|||:||...:.......:|.
 Worm   656 GGYMFVKKSADNYGPVIPEILLTILKQAKANRPNDRPDELLIYFSGVSEGQHALVNEYYANQVKA 720

  Fly  1061 ACD--KVGCKPKICCVIVVKRHHTRFFPS---GDVTTSNKFNNVDPGTVVDRTIVHPNEMQFFMV 1120
            ||.  ....:|.|..::..|.|:||.:.|   |.|.      ||:||||:|.|||.|...:::..
 Worm   721 ACGLFNESFRPHITLILASKVHNTRVYKSENGGGVC------NVEPGTVIDHTIVSPVLSEWYHA 779

  Fly  1121 SHQAIQGTAKPTRYNVIENT-GNLDIDLLQQLTYNLCHMFPRCNRSVSYPAPAYLAHLVAARGRV 1184
            ...|.|||:|..:|::|.|| .|..:.:.::||..||:.........|.|.|.::|...:.||  
 Worm   780 GSLARQGTSKLVKYSLIFNTKKNEKLSVYERLTNELCYEMQIVFHPTSLPIPLHIAGTYSERG-- 842

  Fly  1185 YLTGTNRFLDLKK 1197
                 ::.|.|||
 Worm   843 -----SQMLALKK 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO2NP_730054.1 ArgoN 471..543 CDD:465134 15/80 (19%)
ArgoL1 554..601 CDD:462567 14/76 (18%)
PAZ 605..719 CDD:239207 31/126 (25%)
Piwi_ago-like 764..1186 CDD:240015 113/457 (25%)
sago-1NP_504610.1 PAZ 281..412 CDD:198017 37/158 (23%)
Piwi-like 443..844 CDD:239208 111/443 (25%)

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