DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGO2 and AGO1

DIOPT Version :10

Sequence 1:NP_730054.1 Gene:AGO2 / 39683 FlyBaseID:FBgn0087035 Length:1217 Species:Drosophila melanogaster
Sequence 2:XP_061517419.1 Gene:AGO1 / 1280922 VectorBaseID:AGAMI1_003573 Length:955 Species:Anopheles gambiae


Alignment Length:976 Identity:301/976 - (30%)
Similarity:447/976 - (45%) Gaps:143/976 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 YQQRPSGQQQGGHQQGRQGQEGGYQQRPPGQQPNQTQSQGQYQSRGPP----------------- 390
            |....:..|..|...|:...|..:...|| :.|:.:|||..:.:..||                 
Mosquito    20 YSDMATHIQLNGVIMGKSFNESPWTSSPP-RPPSPSQSQTSFDTLSPPPAGATVNPTTVATTTGT 83

  Fly   391 QQQQA-----APLPLPPQ-PAGSIKR----GTIGKPGQVGINYLDLDLSKMPSVAYHYDVKIMPE 445
            |..||     |..|.||. |..:..|    |..|:|..:..|:..:.:.:  ...:|||:.|.|:
Mosquito    84 QGAQALGVVPATPPAPPDLPVFTCPRRPNLGREGRPIVLRANHFQITMPR--GFVHHYDINIQPD 146

  Fly   446 R-PKKFYRQAFEQF--RVDQLGGAVL-AYDGKASCYSVDKLPLNSQNPEVTVT---DRNGRTLRY 503
            : |:|..|:..|..  ...::.||:. .:||:.:.|:.|.||:.:...|:.||   :...|..|.
Mosquito   147 KCPRKVNREIIETMVHAYSKMFGALKPVFDGRNNLYTRDLLPIGNDRVELEVTLPGEGKDRVFRV 211

  Fly   504 TIEIKETGDSTIDLKSLTTYMNDRIFDKPMRAMQCVEVVLASPCHNKAIRVGRSFFKMSDPNNRH 568
            ||:    ..:.:.|.:|...:..|....|..|:..::||:..........||||||...| ...|
Mosquito   212 TIK----WVAQVSLFNLEEALEGRTRQIPYDAILALDVVMRHLPSMTYTPVGRSFFSSPD-GYYH 271

  Fly   569 ELDDGYEALVGLYQAFMLGDRP-----FLNVDISHKSFPISMPMIEYL-ERFSLKAKINNTTN-- 625
            .|..|.|...|.:|:.    ||     .||:|:|..:|..:.|:||:: |...:: .||....  
Mosquito   272 PLGGGREVWFGFHQSV----RPSQWKMMLNIDVSATAFYKAQPVIEFMCEVLDIR-DINEQRKPL 331

  Fly   626 LDYSRRFLEPFLRGINVVYTPPQSFQSAPRVYRVNGLSRAPASSETFE---HDGKKV--TIASYF 685
            .|..|......::|:.:..|...:.:   |.|||..::|.||..::|.   .:|:.|  |:|.||
Mosquito   332 TDSQRVKFTKEIKGLKIEITHCGTMR---RKYRVCNVTRRPAQMQSFPLQLENGQTVECTVAKYF 393

  Fly   686 HSR-NYPLKFPQLHCLNVGSSIKSILLPIELCSIEEGQALNRKDGATQVANMIKYAATSTNVRKR 749
            ..: ...|::|.|.||.||...|...||:|:|:|..||...:|....|.:.|||..|.|...|:|
Mosquito   394 LDKYKMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRER 458

  Fly   750 KIMNLLQYFQHNLDPTISRFGIRIANDFIVVSTRVLSPPQVEYHSK----------------RFT 798
            :|.||::....|.|..:..||:.|:|:.:.|..|||.||:::|..:                ...
Mosquito   459 EINNLVRRADFNNDAYVQEFGLTISNNMMEVRGRVLPPPKLQYGGRVSSMSGQLLSGPQNKVSLA 523

  Fly   799 MVKNGSWRMDGMKF---LEPKPKAHKCAVLYCDPRSGRKMNYTQ-----LNDFGNLIISQGKAVN 855
            :...|.|.|.|.:|   :|.:..|..|.......|.....|:||     .||.|..||.|.....
Mosquito   524 LPNQGVWDMRGKQFFTGVEIRVWAIACFAPQRTVREDALRNFTQQLQKISNDAGMPIIGQPCFCK 588

  Fly   856 ISLDSDVTYRPFTDDERSLDTIFADLKRSQHDLAIVIIPQFRISYDTIKQKAELQHGILTQCIKQ 920
            .:...|.....|    |.|.:.|:.|:     |.:|::|.....|..:|:..:...|:.|||::.
Mosquito   589 YATGPDQVEPMF----RYLKSTFSHLQ-----LVVVVLPGKTPVYAEVKRVGDTVLGMATQCVQA 644

  Fly   921 FTVERKCNNQTIGNILLKINSKLNGINH--------KIKDDPRLPMMKNTMYIGADVTHPSPDQR 977
            ..| .|.:.||:.|:.||||.||.|||.        |:.|:|       .:::|||||||.....
Mosquito   645 KNV-NKTSPQTLSNLCLKINVKLGGINSILVPSIRPKVFDEP-------VIFLGADVTHPPAGDN 701

  Fly   978 EIPSVVGVAASHDPYGASYNMQYRLQRGALEEIEDMFSITLEHL-RVYKEYRNAYPDHIIYYRDG 1041
            :.||:..|..|.|.:.:.|....|:|:...|.|:::.|:..|.| ..||......|..||.||||
Mosquito   702 KKPSIAAVVGSMDAHPSRYAATVRVQQHRQEIIQELSSMVRELLIMFYKSTGGFKPHRIILYRDG 766

  Fly  1042 VSDGQFPKIKNEELRCIKQACDKVGC--KPKICCVIVVKRHHTRFFPSGDVTTSNKFNNVDPGTV 1104
            ||:||||.:...||..|::||.|:..  ||.|..::|.||||||.|.:.....|.|..|:..||.
Mosquito   767 VSEGQFPHVLQHELTAIREACIKLEADYKPGITFIVVQKRHHTRLFCADKKEQSGKSGNIPAGTT 831

  Fly  1105 VDRTIVHPNEMQFFMVSHQAIQGTAKPTRYNVIENTGNLDIDLLQQLTYNLCHMFPRCNRSVSYP 1169
            ||..|.||.|..|::.|||.||||::|:.|:|:.:..:.:.|.||.|||.|||.:.||.||||.|
Mosquito   832 VDVGITHPTEFDFYLCSHQGIQGTSRPSHYHVLWDDNHFESDELQCLTYQLCHTYVRCTRSVSIP 896

  Fly  1170 APAYLAHLVAARGRVYLTGTNRFLDLKKEY-------------------AKRTIVPEFMKKNPMY 1215
            ||||.|||||.|.|.:|        ::||:                   ..|.|......|..||
Mosquito   897 APAYYAHLVAFRARYHL--------VEKEHDSGEGSHQSGCSEDRTPGAMARAITVHADTKKVMY 953

  Fly  1216 F 1216
            |
Mosquito   954 F 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO2NP_730054.1 ArgoN 471..543 CDD:465134 19/74 (26%)
ArgoL1 554..601 CDD:462567 19/51 (37%)
PAZ 605..719 CDD:239207 36/122 (30%)
Piwi_ago-like 764..1186 CDD:240015 162/456 (36%)
AGO1XP_061517419.1 None

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