DRSC/TRiP Functional Genomics Resources

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Protein Alignment AGO2 and piwil4

DIOPT Version :10

Sequence 1:NP_730054.1 Gene:AGO2 / 39683 FlyBaseID:FBgn0087035 Length:1217 Species:Drosophila melanogaster
Sequence 2:XP_012813692.2 Gene:piwil4 / 100486962 XenbaseID:XB-GENE-993661 Length:853 Species:Xenopus tropicalis


Alignment Length:924 Identity:204/924 - (22%)
Similarity:363/924 - (39%) Gaps:199/924 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 RP----SGQQQGGHQQGRQGQEGGYQQRPSGQ------QQGGHQQGRQGQEGGYQQRPPGQQPNQ 377
            ||    |...||.......|::.|.....:|:      ::|| :.||..|:.|...|       |
 Frog    34 RPDAGSSKDLQGIGSGNGSGRDSGIGTISAGENRYVLAERGG-RNGRNLQDFGINTR-------Q 90

  Fly   378 TQSQGQYQSRGPPQQQQAAPLPLPPQPAGSIKRGTIGKPGQVGINYLDLDLSKMPSVAYHYDVKI 442
            |.:.                       ....|.||.|.|.::..|...|.|.....: |.|.|..
 Frog    91 TMAH-----------------------VKDHKTGTSGAPVKLMTNLFGLTLPTQWKL-YQYRVDF 131

  Fly   443 MPERPKKFYRQAFEQFRVDQLGGAVLAYDGKASCYSVDKLPLNSQNPEVTVTDRNGRTLRYTIEI 507
            .||...:..:.|......:.||.| .|:.|:....|.:...||    .:..|.|.|.|::.||.:
 Frog   132 SPEFASRKLKTALLYSHGETLGRA-RAFHGEILFLSRNIGKLN----HLESTTRKGETVKITITL 191

  Fly   508 KE--TGDSTIDLKSLTTYMNDRIFDKPMRAMQCVEVVLASPCHNKAIRVGRSFFKMSD----PNN 566
            ..  ..||.:.::....     :|.|..:::...:             |||:::..:|    |.:
 Frog   192 TNQLPADSPVCIQFFGI-----LFKKVFKSLNMYQ-------------VGRNYYNPADPVIIPQH 238

  Fly   567 RHELDDGYEALVGLYQAFMLGDRPFLNVDISHKSFPISMPMIEYLERFSLKAKINNTTNLD---- 627
            |..|..|:     :.....|..:..|..|:|||                   .:.|.|.||    
 Frog   239 RLMLWPGF-----VLSIMKLESQLALCADVSHK-------------------VLRNETVLDSMKA 279

  Fly   628 -YSR----RF---LEPFLRGINVVYTPPQSFQSAPRVYRVNGLSRAPASSETF-EHDGKKVTIAS 683
             ||:    ||   .|..|.|: ||.|...:     :.|||:.:..:...:::| ..||.::|...
 Frog   280 LYSKVPKERFTDICEKELLGL-VVLTRYNN-----KTYRVDDIDWSTKPTDSFPRKDGSEITYTD 338

  Fly   684 YFHSRNYPLKFPQLHCLNVGSSIKS------------ILLPIELCSIEEGQALNRKDGATQVANM 736
            |: |:.|.:....|....:.|::|:            .|:| |||.:   ..|:.:  |.....:
 Frog   339 YY-SQQYSINISDLQQPMLVSTLKAKKSDNPDAPRAVHLIP-ELCYL---TGLSSR--ALSDFRL 396

  Fly   737 IKYAATSTNV----RKRKIMNLLQYFQHNLDPT--ISRFGIRIANDFIVVSTRVLSPPQVEYHSK 795
            :|..:..|.:    |::::..|....|...:.:  :.::|:|:... |.|:.|:..|.::.....
 Frog   397 MKDLSMETQLDPERRQQRLQRLADSIQRTPEASAELEKWGLRMDKQ-IPVTGRIAPPERIFMRDN 460

  Fly   796 RFTMVKNGSWRMDGMKFLEPKPKAHKCAVLYCDPRSGRKM--NYTQLNDFGNLI-----ISQGKA 853
            ..|......|..|          .....|:...|.....|  :|...:...||:     ::.|..
 Frog   461 VCTPGSPADWARD----------TRNEKVICVAPLQNWLMLFSYRNADVAENLLQCLMKVASGMG 515

  Fly   854 VNISL-------DSDVTY-----RPFTDDERSLDTIFADLKRSQHDLAIVIIPQFRISYDTIKQK 906
            .::.:       |:.|::     :..|.|   |..:|..:..:|.|           |||:||:.
 Frog   516 FHMDMPRIVQVEDNPVSFLRTLQKNVTPD---LQLVFCVIPTNQKD-----------SYDSIKKF 566

  Fly   907 AELQHGILTQCIKQFTVERKCNNQTIGN-ILLKINSKLNGINHKIKDDPRLPMMKNTMYIGADVT 970
            ..|...:.:||::..|:.|:....::.| |.:::..||.|....::    :| :|..|.:|.|:.
 Frog   567 LSLDQPVPSQCVQNRTLGRQQMMMSVANKIAMQMICKLGGELWAVE----IP-LKALMVVGIDIN 626

  Fly   971 HPSPDQREIPSVVGVAASHDPYGASYNMQYRLQRGALEEIEDMFSITLE-HLRVYKEYRNAYPDH 1034
            ..:.::.  .||||..||.:.....::.:..:|: ...:..|...:.:: .::.::...|..|:.
 Frog   627 KDAVNKS--MSVVGFVASTNARLTRWHSRCIIQK-TTSDFADCLKMCMKGAIQNWQRCNNDLPNR 688

  Fly  1035 IIYYRDGVSDGQFPKIKNEELRCIKQAC--DKVGCKPKICCVIVVKRHHTRFFPSGDVTTSNKFN 1097
            |:.|||||.|||...:.:.|:..:..:.  .|....|::..::|.|:..:||:    ..|.....
 Frog   689 IVVYRDGVGDGQLKMVVDYEIPQLLSSFRETKTSYCPRLSVIVVRKKCISRFY----TQTGRGIQ 749

  Fly  1098 NVDPGTVVDRTIVHPNEMQFFMVSHQAIQGTAKPTRYNVIENTGNLDIDLLQQLTYNLCHMFPRC 1162
            |...||:||.....|....|:::|..|.|||..||.|||:.:...|..|.:|:|||.|||::...
 Frog   750 NPVLGTIVDSEATRPEWYDFYLISQNARQGTVNPTYYNVLLDENGLKPDHMQRLTYKLCHLYYNW 814

  Fly  1163 NRSVSYPAPAYLAH 1176
            ...:..|||...||
 Frog   815 PGVIRVPAPCQYAH 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGO2NP_730054.1 ArgoN 471..543 CDD:465134 14/73 (19%)
ArgoL1 554..601 CDD:462567 14/50 (28%)
PAZ 605..719 CDD:239207 32/138 (23%)
Piwi_ago-like 764..1186 CDD:240015 102/438 (23%)
piwil4XP_012813692.2 ArgoL1 222..269 CDD:462567 14/70 (20%)
PAZ 271..409 CDD:198017 35/150 (23%)
Piwi_piwi-like_Euk 395..836 CDD:240016 107/471 (23%)

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