DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CrebA and Atf6

DIOPT Version :9

Sequence 1:NP_524087.3 Gene:CrebA / 39682 FlyBaseID:FBgn0004396 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001074773.1 Gene:Atf6 / 226641 MGIID:1926157 Length:656 Species:Mus musculus


Alignment Length:367 Identity:93/367 - (25%)
Similarity:144/367 - (39%) Gaps:78/367 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 HFQLPQHLYDN---------DCSSSVSSLRDGSMSPDICSDIEIDESAIKDEPMSP-DSSCP-AS 226
            ||......|:|         |.....|.|  .|.....|||::.:     .:|:|| .|||. :|
Mouse    35 HFDAAHEAYENNFDHLNFDLDLMPWESDL--WSPGSHFCSDMKAE-----PQPLSPASSSCSISS 92

  Fly   227 PTSQASSSQHQLSLNLAHLQSEMLFEPKHCGLLLTASSNSNNSLIKSQQRQQQILGQDNLLMAKM 291
            |.|..|.|..|      |:..|:                   .|:.|.|....:.|......:.:
Mouse    93 PRSTDSCSSTQ------HVPEEL-------------------DLLSSSQSPLSLYGDSCNSPSSV 132

  Fly   292 E-IKSEKQSTSNSSDKSHAHGYGIPLTPPSSLPSDDSEGNLSPEHLFAPLSPNATVSISVANPAG 355
            | :|.||..|...:...|.      |||...:.. .|:.::.|:.|..|.:|....:.||  || 
Mouse   133 EPLKEEKPVTGPGNKTEHG------LTPKKKIQM-SSKPSVQPKPLLLPAAPKTQTNASV--PA- 187

  Fly   356 GESSVRVSRTAASITRSSSGS-ASASGSSTSSTVTTTRQP----IHTP--LISSQP--KGSTGTL 411
              .::.:....|.:..:...| .|...:.|........||    :.:|  |.|:||  ..:.|..
Mouse   188 --KAIIIQTLPALMPLAKQQSIISIQPAPTKGQTVLLSQPTVVQLQSPAVLSSAQPVLAVTGGAA 250

  Fly   412 LLTEEEKRTLLAE--GYPIPQKLPLTKAEEKS-----------LKKIRRKIKNKISAQESRRKKK 463
            .|.......|.|.  ..|:..||.:||...:|           |::.:|.|||:.||.:||:|||
Mouse   251 QLPNHVVNVLPAPVVSSPVNGKLSVTKPVLQSATRSMGSDIAVLRRQQRMIKNRESACQSRKKKK 315

  Fly   464 EYMDQLERRVEILVTENHDYKKRLEGLEETNANLLSQLHKLQ 505
            |||..||.|::..::||...||....|:.....::|:..:|:
Mouse   316 EYMLGLEARLKAALSENEQLKKENGSLKRQLDEVVSENQRLK 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CrebANP_524087.3 bZIP_CREB3 452..502 CDD:269837 19/49 (39%)
coiled coil 452..495 CDD:269837 18/42 (43%)
Atf6NP_001074773.1 Transcription activation. /evidence=ECO:0000305 1..137 30/133 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..169 28/130 (22%)
Ribophorin_II <223..>298 CDD:368624 18/74 (24%)
Basic motif 295..326 17/30 (57%)
bZIP_ATF6 296..347 CDD:269848 22/50 (44%)
coiled coil 296..347 CDD:269848 22/50 (44%)
Leucine-zipper 335..342 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 391..429
Interaction with THBS4. /evidence=ECO:0000269|PubMed:22682248 455..575
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 632..656
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834551
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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