DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-H and Gasp

DIOPT Version :10

Sequence 1:NP_001034020.1 Gene:obst-H / 39681 FlyBaseID:FBgn0053983 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster


Alignment Length:278 Identity:60/278 - (21%)
Similarity:89/278 - (32%) Gaps:89/278 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKYLIHLCLVLLWSSRINADHFDECDGMDDGAFVQSWESCQSYVYCEGEESLKGDCEDGEYFDS 65
            |.|:|:  ..|.|:.:.:....| :|.  ||..|.....||..|..|:...|....|.:|..||:
  Fly     1 MKKFLV--VFVALFGAAVAQSSF-KCP--DDFGFYPHDTSCDKYWKCDNGVSELKTCGNGLAFDA 60

  Fly    66 E-----AGTCDIAANVSCFLDEVDEPSDPEPETDEEEEEIPATPRPTEPPIVETPTEVDIINIAP 125
            .     ...||...||.|              .|..|         .||||. ||....:..|.|
  Fly    61 TDSKYLTENCDYLHNVDC--------------GDRTE---------LEPPIT-TPHCSRLYGIFP 101

  Fly   126 VVRPNCPISDDPGQVIFMASNNSCTNYYLCYHGHAMEMHCDNELYFNSLTGQCDYPDKV-QCAFE 189
                               ..|.|..::.|::|......|...|.::.....|.:.|:| :|..|
  Fly   102 -------------------DENKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPECKNE 147

  Fly   190 DPRSHKCLPHMTEF--------FPHPDNCNYFYYCIKGFLTLQQCPF------------------ 228
            :..:....|...|.        ..||::|..:|.|::|......||.                  
  Fly   148 EVANGFSCPAAGELANAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDSDGTGNCEDP 212

  Fly   229 --------YYGWDIERRS 238
                    ||| |::.:|
  Fly   213 EDVPGCEDYYG-DLDLKS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-HNP_001034020.1 CBM_14 26..77 CDD:426342 16/55 (29%)
CBM_14 142..184 CDD:426342 8/41 (20%)
ChtBD2 203..240 CDD:214696 13/70 (19%)
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 15/53 (28%)
CBM_14 97..144 CDD:426342 11/65 (17%)
CBM_14 170..218 CDD:426342 8/47 (17%)

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