DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-H and obst-G

DIOPT Version :9

Sequence 1:NP_001034020.1 Gene:obst-H / 39681 FlyBaseID:FBgn0053983 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster


Alignment Length:268 Identity:61/268 - (22%)
Similarity:99/268 - (36%) Gaps:55/268 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 CDGMDDGAFVQSWESCQSYVYCEGEESLKGDCEDGEYFDSEAGTCDIAANVSCFLDE----VDEP 86
            |:| .:|..:..:.||:.|..|....::.|.||....|:.....||...||.|..|.    ||:.
  Fly    32 CEG-KNGGLLPMFGSCKGYYVCADGNAVTGTCEKNTLFNPLTLHCDDPDNVDCIFDGKDNIVDDT 95

  Fly    87 SDPEPETDEEEE----EIPATPRPTEPPIVETPTEVDIINIAPVVRPNCPISDDPGQVIFMASNN 147
            |..|.:.|::||    :.|.|.:.|:.|   .||.:|.:         |....|.   :.:..|.
  Fly    96 SSSESDEDDDEEMAKTDPPVTVKATKKP---RPTTLDKM---------CAGKKDG---VMLTKNG 145

  Fly   148 SCTNYYLCYHGHAMEMH---CDNELYFNSLTGQCDYPDKVQCA------------------FEDP 191
            ||..||:|   .|.:.|   |.::.:|:.....|....:.:|:                  ..|.
  Fly   146 SCQEYYVC---KAKKPHLRSCPDKQHFSPTRRICMKASEAKCSGGTRENKESDGPATTGGVCSDE 207

  Fly   192 RSHKCLPHMTEFFPHPDNCNYFYYCIKGFLTLQQCPFYYGWDIERRSCVQIGVAKCYGNSRRIGR 256
            :.:..:.|.::       |..|..|......:..||....::|....|....:|||.........
  Fly   208 KENSLVAHRSD-------CGKFMLCSNMMFLVMDCPTGLHFNIATSRCDYPKIAKCQTKLNESKS 265

  Fly   257 KAPLPPRK 264
            |:..|.||
  Fly   266 KSKKPVRK 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-HNP_001034020.1 CBM_14 26..77 CDD:279884 14/50 (28%)
CBM_14 142..184 CDD:279884 11/44 (25%)
ChtBD2 203..240 CDD:214696 6/36 (17%)
obst-GNP_648529.1 CBM_14 32..83 CDD:279884 15/51 (29%)
CBM_14 132..184 CDD:279884 13/57 (23%)
CBM_14 204..256 CDD:279884 10/58 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D487374at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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