DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-H and cht-1

DIOPT Version :10

Sequence 1:NP_001034020.1 Gene:obst-H / 39681 FlyBaseID:FBgn0053983 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_508588.1 Gene:cht-1 / 180628 WormBaseID:WBGene00000503 Length:617 Species:Caenorhabditis elegans


Alignment Length:168 Identity:36/168 - (21%)
Similarity:55/168 - (32%) Gaps:26/168 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ADHFDECDGMDDGAFVQSWESCQSYVYCEGEESLKGDCEDGEYFDSEAGTCDIAANVSCFLDEVD 84
            |.:.:.|.|..||.:..| .:|..:|.|...:|....|..|..:.:....|..:....|.:....
 Worm   475 ASNTNVCSGKSDGFYPNS-NNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTR 538

  Fly    85 EPSDPEPETDEEEEEIPATPRPTEPPIVETPTEVDIINIAPVVRPNCPISDDPGQVIFMASNNSC 149
            .|:       ...:..|.....|..|...||..            .|....      |....:.|
 Worm   539 APT-------TTTKSAPTVTTTTRAPTTTTPAF------------KCTKDG------FFGVPSDC 578

  Fly   150 TNYYLCYHGHAMEMHCDNELYFNSLTGQCDYPDKVQCA 187
            ..:..|.:|.:....|.|.|.|::.|..||.||..:||
 Worm   579 LKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKCA 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-HNP_001034020.1 CBM_14 26..77 CDD:426342 12/50 (24%)
CBM_14 142..184 CDD:426342 13/41 (32%)
ChtBD2 203..240 CDD:214696
cht-1NP_508588.1 GH18_chitolectin_chitotriosidase 55..423 CDD:119351
CBM_14 481..532 CDD:426342 12/51 (24%)
CBM_14 567..615 CDD:426342 13/53 (25%)
Blue background indicates that the domain is not in the aligned region.

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