DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-H and LOC1276311

DIOPT Version :10

Sequence 1:NP_001034020.1 Gene:obst-H / 39681 FlyBaseID:FBgn0053983 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_315638.4 Gene:LOC1276311 / 1276311 VectorBaseID:AGAMI1_005289 Length:1321 Species:Anopheles gambiae


Alignment Length:237 Identity:45/237 - (18%)
Similarity:67/237 - (28%) Gaps:100/237 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 PSDPEPETDEEEEE------------IPATPRPTE-----------------PPIVETPT----E 117
            ||...|:..:::::            :|..|.|||                 .|:...|.    |
Mosquito    86 PSLVGPQQQQQQQQQHGPSGPQYQPGVPLAPYPTETQRSPAYGRSQAYTQQPAPVPLAPRFGYGE 150

  Fly   118 VD--IINIAPVVR----P-----------NCPISDDPGQVIFMASNNSCTNYYLCYHGHAMEMHC 165
            .|  |...||..:    |           .||    .|:.........|..:..|:.|....::|
Mosquito   151 EDRLIGETAPAAKLIRQPVHTLLKDFNGLECP----EGRTGHFPYVMDCRQFLSCWKGRGFILNC 211

  Fly   166 DNELYFNSLTGQCDYPDKVQC---------------------AFEDPRSHK-------------- 195
            .....||..|.:||:|.||.|                     ::.|.|..:              
Mosquito   212 APGTLFNPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKLASYTDQRQPQQFQQQQRQPQYLQP 276

  Fly   196 -----------CLPHMTEFFPHPDNCNYFYYCIKGFLTLQQC 226
                       |.|.:....|||.:|..|..|..|...:|.|
Mosquito   277 QQSLRQQEELTCPPGVIGLRPHPTDCRKFLNCNNGARFVQDC 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-HNP_001034020.1 CBM_14 26..77 CDD:426342
CBM_14 142..184 CDD:426342 10/41 (24%)
ChtBD2 203..240 CDD:214696 9/24 (38%)
LOC1276311XP_315638.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.