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Protein Alignment MsrA and PMSR1
DIOPT Version :9
Sequence 1: | NP_001261879.1 |
Gene: | MsrA / 39675 |
FlyBaseID: | FBgn0000565 |
Length: | 261 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001331838.1 |
Gene: | PMSR1 / 836286 |
AraportID: | AT5G61640 |
Length: | 229 |
Species: | Arabidopsis thaliana |
Alignment Length: | 182 |
Identity: | 61/182 - (33%) |
Similarity: | 95/182 - (52%) |
Gaps: | 21/182 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 LKDLSTVRNEQKELNISPVHDVNVTKATA------TFGMGCFWGAESLYGATRGVLRTTVGYAGG 72
|..|....:.|..::.||:..|...:|.| .||.||||..|..|....||.:|.|||:.|
plant 31 LNKLGIGSSRQTNMDPSPIAQVIDDEAPAPGNQFTQFGAGCFWSVELAYQRVPGVTQTEVGYSQG 95
Fly 73 SSDLPTYRKM----GDHTEVLEIDYDPTVISFKELLDLFWNNHEYGLTTPIKR-------QYASL 126
.:..|:|:.: .:|.|::.:.|||...|::.||||||:.|: .|.:.| ||.|.
plant 96 ITHDPSYKDVCSGTTNHAEIVRVQYDPKECSYQSLLDLFWSKHD---PTTLNRQGNDVGTQYRSG 157
Fly 127 ILYHDEEQKQVAHASKLEEQERRAPEIITTEIASKENFYPAEAYHQKYRLQG 178
|.:::.||:::|..| ||..:::....:.|||...:.||.||.:||:|..:|
plant 158 IYFYNPEQEKLARES-LERHQQQVDRKVVTEILPAKKFYRAEEHHQQYLSKG 208
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MsrA | NP_001261879.1 |
PMSR |
42..174 |
CDD:279899 |
52/148 (35%) |
PMSR1 | NP_001331838.1 |
None |
Information from Original Tools:
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