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Protein Alignment MsrA and PMSR4
DIOPT Version :9
Sequence 1: | NP_001261879.1 |
Gene: | MsrA / 39675 |
FlyBaseID: | FBgn0000565 |
Length: | 261 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_194243.1 |
Gene: | PMSR4 / 828616 |
AraportID: | AT4G25130 |
Length: | 258 |
Species: | Arabidopsis thaliana |
Alignment Length: | 148 |
Identity: | 59/148 - (39%) |
Similarity: | 82/148 - (55%) |
Gaps: | 15/148 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 ATFGMGCFWGAESLYGATRGVLRTTVGYAGGSSDLPTYRKM----GDHTEVLEIDYDPTVISFKE 102
|.||.|||||.|..|....||.:|.|||:.|....|:|..: ..|.||:.:.|||...||:.
plant 94 AQFGAGCFWGVELAYQRVPGVTKTEVGYSHGIVHNPSYEDVCTGTTGHNEVVRVQYDPKECSFES 158
Fly 103 LLDLFWNNHEYGLTTPIKR-------QYASLILYHDEEQKQVAHASKLEEQERRAPEIITTEIAS 160
|||:|||.|: .|.:.| ||.|.|.|:.:||:::|..: :|:|::...:.|.|||..
plant 159 LLDVFWNRHD---PTTLNRQGGDVGTQYRSGIYYYTDEQERIAREA-VEKQQKILNKRIVTEILP 219
Fly 161 KENFYPAEAYHQKYRLQG 178
...||.||.|||:|..:|
plant 220 ATKFYRAENYHQQYLAKG 237
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MsrA | NP_001261879.1 |
PMSR |
42..174 |
CDD:279899 |
57/142 (40%) |
PMSR4 | NP_194243.1 |
PMSR |
96..236 |
CDD:396272 |
57/143 (40%) |
Information from Original Tools:
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