powered by:
Protein Alignment MsrA and msra-1
DIOPT Version :9
| Sequence 1: | NP_001261879.1 |
Gene: | MsrA / 39675 |
FlyBaseID: | FBgn0000565 |
Length: | 261 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_495540.1 |
Gene: | msra-1 / 185709 |
WormBaseID: | WBGene00018393 |
Length: | 207 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 186 |
Identity: | 74/186 - (39%) |
| Similarity: | 102/186 - (54%) |
Gaps: | 11/186 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 42 ATFGMGCFWGAESLYGATRGVLRTTVGYAGGSSDLPTYRKMGDHTEVLEIDYDPTVISFKELLDL 106
|.||:.|||| ||.:...:||:.|.||||||....|||:.:.||||:.||.:||.||.:.:|.:.
Worm 7 AYFGLQCFWG-ESAWAKLKGVVVTRVGYAGGKQPNPTYKNIKDHTEITEITFDPKVIEYSKLTNF 70
Fly 107 FWNNHEYGLTTPI---KRQYASLILYHDEEQKQVAHASKLEEQERRAPEIITTEIASKENFYPAE 168
||.:| .|. |:||.|.|||.:::||:||..:....:::... |.|.|...:.||.||
Worm 71 FWKHH-----NPAERRKKQYQSAILYVNDDQKKVAEETLKVAKDKHGD--IETYIEPLDKFYQAE 128
Fly 169 AYHQKYRLQGHKDLASSLNLSPKLLQTSYVATKLNGYLAGVGGIEQFKAEAETMGL 224
.|||||..:..|.|...|:|....:....:|||||.|.||.......:..|:..||
Worm 129 DYHQKYWFRQKKILFDELSLLDTQVAEGELATKLNAYCAGFQDFHDLERLAKEYGL 184
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| MsrA | NP_001261879.1 |
PMSR |
42..174 |
CDD:279899 |
57/134 (43%) |
| msra-1 | NP_495540.1 |
PMSR |
6..134 |
CDD:376578 |
57/134 (43%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
C160158767 |
| Domainoid |
1 |
1.000 |
111 |
1.000 |
Domainoid score |
I3922 |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0225 |
| Hieranoid |
1 |
1.000 |
- |
- |
|
|
| Homologene |
1 |
1.000 |
- |
- |
|
H42309 |
| Inparanoid |
1 |
1.050 |
128 |
1.000 |
Inparanoid score |
I3247 |
| Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S1937 |
| OMA |
1 |
1.010 |
- |
- |
|
QHG61104 |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1383773at2759 |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001432 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
oto18282 |
| orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100458 |
| Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR42799 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R752 |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
15 | 14.790 |
|
Return to query results.
Submit another query.
