DRSC/TRiP Functional Genomics Resources

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Protein Alignment MsrA and LOC1280320

DIOPT Version :10

Sequence 1:NP_001261879.1 Gene:MsrA / 39675 FlyBaseID:FBgn0000565 Length:261 Species:Drosophila melanogaster
Sequence 2:XP_320164.4 Gene:LOC1280320 / 1280320 -ID:- Length:236 Species:Anopheles gambiae


Alignment Length:216 Identity:140/216 - (64%)
Similarity:172/216 - (79%) Gaps:0/216 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PVHDVNVTKATATFGMGCFWGAESLYGATRGVLRTTVGYAGGSSDLPTYRKMGDHTEVLEIDYDP 95
            |:|.::.....||||||||||.:||:|||:|||||.|||||||::.|.|:||||||||:||||||
Mosquito    21 PLHQIDTPFEKATFGMGCFWGCDSLFGATKGVLRTRVGYAGGSTESPAYKKMGDHTEVIEIDYDP 85

  Fly    96 TVISFKELLDLFWNNHEYGLTTPIKRQYASLILYHDEEQKQVAHASKLEEQERRAPEIITTEIAS 160
            ..||:.:|||||||||||||||.:||||.||||||:|:|:|:|.||:.|||.:||||.|.||||.
Mosquito    86 QTISYIDLLDLFWNNHEYGLTTRMKRQYMSLILYHNEQQRQIAEASRAEEQVKRAPEQIITEIAP 150

  Fly   161 KENFYPAEAYHQKYRLQGHKDLASSLNLSPKLLQTSYVATKLNGYLAGVGGIEQFKAEAETMGLT 225
            ...|||||.||||||||||.|||..:.|:|.||.||:||.:|||||.||.|::||:.||:.:||:
Mosquito   151 AGPFYPAENYHQKYRLQGHTDLAKGIGLTPDLLHTSHVAARLNGYLIGVSGLKQFEDEADLLGLS 215

  Fly   226 PTQRQYCYYHVEQNEGQGLYC 246
            ..|.||...:|.||||.|::|
Mosquito   216 KDQVQYVREYVIQNEGGGIFC 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MsrANP_001261879.1 PMSR 41..174 CDD:460270 96/132 (73%)
LOC1280320XP_320164.4 None

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