DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7857 and Otud6b

DIOPT Version :10

Sequence 1:NP_648769.2 Gene:CG7857 / 39671 FlyBaseID:FBgn0026738 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_690025.3 Gene:Otud6b / 72201 MGIID:1919451 Length:294 Species:Mus musculus


Alignment Length:320 Identity:122/320 - (38%)
Similarity:184/320 - (57%) Gaps:58/320 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DVAIAELESRLDEVSLEDIGARHRRERKDLQAKLQAMKKNAPKNNKNKRKEFLEEMARLEGELEQ 69
            :|...||:   ||   |.:..|||:|:|:||||:|.||...|||:|.:||:..|::|:||.|:||
Mouse     3 EVVAEELD---DE---EQLVRRHRKEKKELQAKIQGMKNAVPKNDKKRRKQLTEDVAKLEREMEQ 61

  Fly    70 RHKAELKAAEAMEAPVLVEPVVKEPAEKPETEVTDDDGIEEKEEQLAPN----------QRVSKA 124
            :|:.||:..:                     ::|..|   .|.:.:|.|          .|:|||
Mouse    62 KHREELEQLK---------------------QLTFKD---SKIDSVAVNISNLVLENQPPRISKA 102

  Fly   125 QKRRDKKA-----KEARAREAEIKTELQNAANQPTPKLIELQQITAKLSQRQLSLHNIPSDGDCL 184
            ||||:|||     :|.|..||||: .|..|.:..:.||.::      |:.|:|.:..|||||.|:
Mouse   103 QKRREKKAALEKEREERIAEAEIE-NLSGARHLESEKLAQI------LAARELEIKQIPSDGHCM 160

  Fly   185 YQSIRHQLIVN--ALPGHSVQELREETANYVRAHKDSLISYMIHPETGDILNDQQFEQYCHDIAK 247
            |.::..||...  ||   :|..||.:||.|::.|.|..:.::.:|.|||:...::|.:||.||..
Mouse   161 YGALEDQLREQDCAL---TVASLRRQTAEYMQTHSDDFLPFLTNPSTGDMYTPEEFGKYCDDIVN 222

  Fly   248 THAWGGHIELKAISSLLRVPIEVIQAEGAPTLLGQEEFGGSPLIICYHRHIYQLGAHYNS 307
            |.||||.:||:|:|.:|:.|||::||:..|.::| ||:..:||::.|.||.|.||.||||
Mouse   223 TAAWGGQLELRALSHILQTPIEILQADAPPIIVG-EEYPRNPLVLVYMRHAYGLGEHYNS 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7857NP_648769.2 COG5539 17..307 CDD:227826 116/306 (38%)
OTU_OTUD6 163..309 CDD:438598 62/147 (42%)
Otud6bNP_690025.3 TOPEUc <7..80 CDD:214661 35/102 (34%)
OTU_OTUD6 139..283 CDD:438598 63/153 (41%)
Cys-loop. /evidence=ECO:0000250 153..159 5/5 (100%)
Variable-loop. /evidence=ECO:0000250 220..230 6/9 (67%)
His-loop. /evidence=ECO:0000250 268..278 6/9 (67%)

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