DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7857 and Otud1

DIOPT Version :10

Sequence 1:NP_648769.2 Gene:CG7857 / 39671 FlyBaseID:FBgn0026738 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_081991.1 Gene:Otud1 / 71198 MGIID:1918448 Length:454 Species:Mus musculus


Alignment Length:248 Identity:64/248 - (25%)
Similarity:106/248 - (42%) Gaps:54/248 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 HKAELKAAEAMEAPVLVEPVVKEPAEKPETEVTDDDGIEEKEEQLA---------PNQRVSKAQK 126
            |:..| ||....||. ..||..||...|.   :...|.|.:.|:.:         .:...|.|.:
Mouse   162 HRQAL-AASQHRAPA-PAPVGPEPGAGPG---SGPWGEERRAERSSRGWDRASGRSDASGSDALR 221

  Fly   127 RRDKKAKEARAREAEIKTELQNAAN---------QPTPK-------LIELQQITAKLSQR-QLSL 174
            |:|.:| ||....|..::..:.|.|         :..|:       |.|:::....|.|| :...
Mouse   222 RQDPEA-EAHPVPAPARSSGEPAQNGEGEAVGTSRADPRDEKLALYLAEVERQDKYLRQRNKYRF 285

  Fly   175 HNIPSDGDCLYQSIRHQLIVNALPGHSVQELREETANYVRAHKDSLISYMIHPETGDILNDQQFE 239
            |.|| ||:|||::: .:.:......|  :||||:|.:|:..|.|. .|.:|..:.|         
Mouse   286 HIIP-DGNCLYRAV-SKTVYGDQSLH--RELREQTVHYIADHLDH-FSPLIEGDVG--------- 336

  Fly   240 QYCHDIAKTHAWGGHIELKAISSLLRVPIEV-----IQAEGAPTL---LGQEE 284
            ::....|:..||.|:.||.|:..:|.|.|.:     :::....|:   ||.|:
Mouse   337 EFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPED 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7857NP_648769.2 COG5539 17..307 CDD:227826 64/248 (26%)
OTU_OTUD6 163..309 CDD:438598 37/131 (28%)
Otud1NP_081991.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..64
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..257 24/100 (24%)
OTU_OTUD1 262..410 CDD:438584 39/142 (27%)
Cys-loop. /evidence=ECO:0000250|UniProtKB:Q5VV17 287..293 4/6 (67%)
His-loop. /evidence=ECO:0000250|UniProtKB:Q5VV17 342..352 4/9 (44%)
Variable-loop. /evidence=ECO:0000250|UniProtKB:Q5VV17 399..404
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.