DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7857 and Otud3

DIOPT Version :9

Sequence 1:NP_648769.2 Gene:CG7857 / 39671 FlyBaseID:FBgn0026738 Length:312 Species:Drosophila melanogaster
Sequence 2:XP_038966554.1 Gene:Otud3 / 500572 RGDID:1560468 Length:423 Species:Rattus norvegicus


Alignment Length:243 Identity:58/243 - (23%)
Similarity:93/243 - (38%) Gaps:82/243 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 RVSKAQKRRDKK-AKEARAREAEIKTELQNAANQPTPKLI----ELQQITAKLSQRQLSLHNIPS 179
            |.::|:::||:: |:.|.|:|..         |:|.|...    |......:|....|.|..:|.
  Rat    16 RRAEAERKRDERAARRALAKERR---------NRPEPGSSGCEEEFVSFANQLQALGLKLREVPG 71

  Fly   180 DGDCLYQSIRHQLIVNALPGHSVQEL--REETANY-VRAHKDSLISYMIHPETGDILNDQQFEQY 241
            ||:||::::..|     |.|||...|  |:||.:| :|..:|      ..|...|   |..||::
  Rat    72 DGNCLFRALGDQ-----LEGHSRNHLKHRQETVDYMIRQRED------FEPFVED---DIPFEKH 122

  Fly   242 CHDIAKTHAWGG---------HIELKAISSLLRVPI-------------------------EVIQ 272
            ...:||...:.|         :.:|..:...|..|:                         |.:|
  Rat   123 VASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQIISKCLSFRLQQTWVCFWVSHQKEPVQ 187

  Fly   273 AEGAPTLLGQEEFGGSPLIICYHRHI-YQLGAHY--------NSTVPA 311
            :.|  .:.|.::.....|      || |:.|.||        ||..||
  Rat   188 SRG--QIRGTDKSSAREL------HIAYRYGEHYDSVRRINDNSEAPA 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7857NP_648769.2 COG5539 17..307 CDD:227826 54/237 (23%)
OTU 178..305 CDD:280496 37/164 (23%)
Otud3XP_038966554.1 OTU 70..>156 CDD:418725 27/99 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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