DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7857 and otud6b

DIOPT Version :9

Sequence 1:NP_648769.2 Gene:CG7857 / 39671 FlyBaseID:FBgn0026738 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_956519.1 Gene:otud6b / 393194 ZFINID:ZDB-GENE-040426-974 Length:293 Species:Danio rerio


Alignment Length:301 Identity:126/301 - (41%)
Similarity:185/301 - (61%) Gaps:29/301 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EVSLEDIGARHRRERKDLQAKLQAMKKNAPKNNKNKRKEFLEEMARLEGELEQRHKAELKAAEAM 81
            |.:.|.:..:||:|:||||||:|:||...|||:|.:||:..|::|:||.||.|:|:.|||    :
Zfish     5 ETAEEQLAKQHRKEKKDLQAKIQSMKNAVPKNDKKRRKQLTEDIAKLEAELSQKHENELK----L 65

  Fly    82 EAPVLVEPVVKEPAEKPETEVTDDDGIEEKEEQLAPNQ--RVSKAQKRRDKKA-----KEARARE 139
            :....||.|         ::..|...:...|||..|::  |.|||||||||||     :|.|..|
Zfish    66 QNTSSVEEV---------SDALDSMSVANHEEQSDPSKQSRTSKAQKRRDKKAALEKEREMRIAE 121

  Fly   140 AEIKTELQNAANQPTPKLIELQQITAKLSQRQLSLHNIPSDGDCLYQSIRHQLIVNALPGHSVQE 204
            ||:: .|..:.:|...||.|      ||.:|.|.:..|.|||.|:|:::.|||....| ...::|
Zfish   122 AEVE-NLSGSRHQEGLKLRE------KLVERHLQIKEISSDGHCMYRAVEHQLTERGL-ALGLKE 178

  Fly   205 LREETANYVRAHKDSLISYMIHPETGDILNDQQFEQYCHDIAKTHAWGGHIELKAISSLLRVPIE 269
            ||::||.|:|:|.|..:.::.:|.|||:...::||:||.|:|.|.||||.:||||:|.:|::|||
Zfish   179 LRDQTAQYMRSHADDFMPFLTNPNTGDMYTAEEFEKYCSDVADTAAWGGQLELKALSQVLQLPIE 243

  Fly   270 VIQAEGAPTLLGQEEFGGSPLIICYHRHIYQLGAHYNSTVP 310
            ||||: :|.:...||:....:.:.|.||.|.||.||||..|
Zfish   244 VIQAD-SPCITIGEEYDKPKITLIYMRHAYGLGEHYNSVEP 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7857NP_648769.2 COG5539 17..307 CDD:227826 123/296 (42%)
OTU 178..305 CDD:280496 55/126 (44%)
otud6bNP_956519.1 TMPIT 1..>67 CDD:285135 31/65 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 19/37 (51%)
COG5539 2..282 CDD:227826 125/298 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..114 25/69 (36%)
Cys-loop. /evidence=ECO:0000250 152..158 4/5 (80%)
OTU 154..278 CDD:280496 55/125 (44%)
Variable-loop. /evidence=ECO:0000250 219..229 6/9 (67%)
His-loop. /evidence=ECO:0000250 267..277 6/9 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5474
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6064
Inparanoid 1 1.050 223 1.000 Inparanoid score I3506
OMA 1 1.010 - - QHG54513
OrthoDB 1 1.010 - - D1541668at2759
OrthoFinder 1 1.000 - - FOG0003029
OrthoInspector 1 1.000 - - oto38972
orthoMCL 1 0.900 - - OOG6_102788
Panther 1 1.100 - - LDO PTHR12419
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3778
SonicParanoid 1 1.000 - - X2018
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1414.010

Return to query results.
Submit another query.