DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7857 and otub-4

DIOPT Version :9

Sequence 1:NP_648769.2 Gene:CG7857 / 39671 FlyBaseID:FBgn0026738 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_500333.3 Gene:otub-4 / 177104 WormBaseID:WBGene00015249 Length:436 Species:Caenorhabditis elegans


Alignment Length:258 Identity:60/258 - (23%)
Similarity:93/258 - (36%) Gaps:94/258 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 APVLVEPVVKEPAEKPETEVTDDDGIEEKEEQLAPN--QRVSKAQKRRDKKAKEARAREAEIKTE 145
            :|||       |..:||.|               ||  |....|....|.:.:....|:.||:||
 Worm    83 SPVL-------PPPQPEIE---------------PNRSQSPGNADYNSDDEYEMQNIRDDEIETE 125

  Fly   146 LQNAANQPTPKLIELQQITAKLSQRQLSLHNIPSDGDCLYQSIRHQLIVNALPGHSVQE----LR 206
            ..|                 :|:.|.|.:..:..||.|:::||..|:       :..||    :|
 Worm   126 FSN-----------------RLAARGLIIKEMVGDGACMFRSIAEQI-------YGDQEMHGQIR 166

  Fly   207 EETANYVRAHKDSLISYMIHPETGDILNDQQFEQYCHDIAKTHAWGGHIELKAISSLLRVPIEVI 271
            ....:|:..::|....::          .:.||.|.....:.:..|.|:||:|||.:...|:||.
 Worm   167 RLCMDYMSNNRDHFKEFI----------TENFENYIQRKREENVHGNHVELQAISEMFARPVEVY 221

  Fly   272 QAEGAP--TLLGQEE------FGGS-------------------PLIICYHRHIYQLGAHYNS 307
            |....|  .||.:.|      ..||                   ||.:.|||.:     |||:
 Worm   222 QYSDEPINVLLPRPEPEATALTDGSASTSNAAPPPSTVPIQQNPPLRLSYHRAV-----HYNA 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7857NP_648769.2 COG5539 17..307 CDD:227826 59/256 (23%)
OTU 178..305 CDD:280496 36/157 (23%)
otub-4NP_500333.3 OTU 142..277 CDD:388712 36/156 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.