DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7272 and swt-4

DIOPT Version :10

Sequence 1:NP_648768.1 Gene:CG7272 / 39670 FlyBaseID:FBgn0036501 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001368659.1 Gene:swt-4 / 189708 WormBaseID:WBGene00012647 Length:243 Species:Caenorhabditis elegans


Alignment Length:246 Identity:60/246 - (24%)
Similarity:103/246 - (41%) Gaps:55/246 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ALGDLLAPHSELIAKVAGTITTLQFLSGVVLMNDIRKKGSSDVYPVGPFLFGVVLTVLSLKLANI 67
            :||..:.|:   ::..|.:.|...||.|:.:.:.|:.:|||:.....|||...:...|.::...:
 Worm    22 SLGQTILPY---LSFTALSSTVAFFLCGLQICHRIKTRGSSEGTSPAPFLLSFLSCGLFIQYGLL 83

  Fly    68 MNDAAMINTNLIGLVINFVFLFGFYYYASSASRSKIWKQIGYSSVFLLAITAYANFEDPAKIEFR 132
            .:|..:...|.||..:...:|..|||...:..             ||..:           |...
 Worm    84 KDDDVITYCNGIGCFLQACYLMYFYYMTRNRR-------------FLNKV-----------ISIE 124

  Fly   133 LGMLITGILV-WM-------------------------VGSPLLHLPKIIEKKSTEGMPFPIIFA 171
            ||  |.||:| |:                         |.:||..:.|::..||:|.:|.|:..|
 Worm   125 LG--IIGIVVYWVAHSTNSHLTKTTYVGNYCIFLNICSVAAPLFDIGKVVRNKSSESLPLPLCVA 187

  Fly   172 GNLVAFSWTLYAISIKNTVMVLQNLLLLVLGGIQLSMFAIYPNKPAAEKPK 222
            ..:|...|..|...:.:.|:::.|::..|:..:|||:|.|||..||...|:
 Worm   188 CFVVCLQWMFYGYIVDDIVILVPNVIATVISILQLSLFIIYPGAPAGVLPQ 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7272NP_648768.1 MtN3_slv 18..95 CDD:481124 21/76 (28%)
MtN3_slv 131..217 CDD:481124 30/111 (27%)
swt-4NP_001368659.1 MtN3_slv 29..115 CDD:397278 22/88 (25%)
MtN3_slv 148..233 CDD:481124 23/84 (27%)

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