DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7272 and swt-7

DIOPT Version :10

Sequence 1:NP_648768.1 Gene:CG7272 / 39670 FlyBaseID:FBgn0036501 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_504349.1 Gene:swt-7 / 178890 WormBaseID:WBGene00019645 Length:224 Species:Caenorhabditis elegans


Alignment Length:203 Identity:52/203 - (25%)
Similarity:88/203 - (43%) Gaps:19/203 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DIRKKGSSDVYPVGPFLFGVVLTVLSLKLANIMNDAAMINTNLIGLVINFVFLFGFYYYASSASR 100
            |..|:|::|.:....|:..:::....|:...:.||    .||:|...||.|| |.||..|.:..:
 Worm    27 DWHKRGTADGFSSVNFVLPMLVQSFWLRHGYMTND----QTNIIINSINLVF-FAFYVSAFAYYQ 86

  Fly   101 SKIWKQIGYSSVFLLAIT---AYANFEDPAKIEFRLGMLITGILVWMVGSPLLHLPKIIEKKSTE 162
            .|....||......||:.   ||.:..|.|.|...:|.:..|..::.:...:..:.:.|...:||
 Worm    87 PKRKYLIGQIVAAALAVKVAFAYVDTHDSASINDAMGSMAAGAQIFSLVGGIYEIKRAISMGTTE 151

  Fly   163 GMPFPIIFAGNLVAFSWTLYAISIKNTVMVLQNLLLLVLGGIQLSMFAIYP---------NKPAA 218
            .:|....||...:...|.|:.|...|..:.:.|...|::....|:::..||         |.|  
 Worm   152 YIPAGFQFAIFTLILQWLLFGILHGNQFIAISNAAGLLVNIATLALYFFYPPLTWTVPIFNIP-- 214

  Fly   219 EKPKDSKK 226
            .:.||:||
 Worm   215 PQNKDAKK 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7272NP_648768.1 MtN3_slv 18..95 CDD:481124 18/58 (31%)
MtN3_slv 131..217 CDD:481124 18/94 (19%)
swt-7NP_504349.1 MtN3_slv 10..90 CDD:481124 20/67 (30%)

Return to query results.
Submit another query.