DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7275 and Dcaf13

DIOPT Version :9

Sequence 1:NP_648767.1 Gene:CG7275 / 39669 FlyBaseID:FBgn0036500 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001167029.1 Gene:Dcaf13 / 362902 RGDID:1308458 Length:445 Species:Rattus norvegicus


Alignment Length:442 Identity:263/442 - (59%)
Similarity:335/442 - (75%) Gaps:1/442 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVKMISRNPDNYVRETKLQQHKMPRNYDPSLHPLEGPREYVRALNATKLDRVFAKPFVCNLSGH 65
            |||||:|||||||||||||...::||||||:|||.|.|||||||||||||:|||||||:.:|.||
  Rat     1 MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGH 65

  Fly    66 RDGVSCFGKHPKQLSTLATGAYDGEVRIWDLANRISSRNFVAHDGFVRGIAYTQNGGRIFTVGDD 130
            ||||:|..||||.|:|:.:||.||||:||:|..|...|...||:||||||.....|...||||||
  Rat    66 RDGVNCLAKHPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTRFCGTSFFTVGDD 130

  Fly   131 KTIKVWKAEAPEVGEDEVPVNTILSKFGLHGISHNRRDNKFATCGEVCAIWDERHNDPLKTLKWG 195
            ||:|.||.:.|..||:|.|:.|:|.|....||.|:.:|..|||||:...||||:...|:.::.||
  Rat   131 KTVKQWKMDGPGCGEEEEPLYTVLGKTVYTGIDHHWKDPAFATCGQQVDIWDEQRTSPVCSMNWG 195

  Fly   196 VDTLHTISYNPVETSILACCASDRSIILYDQREAQPLRKVVLTMKSNKLAWNPMEAFNFTVANED 260
            .|::.::.:||:||.:|..|||||:|:|||.|:|.||:||:|.|::|.:.||||||||||.||||
  Rat   196 FDSISSVKFNPIETYLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFNFTAANED 260

  Fly   261 CNLYTFDTRKLQTPLKVHFDHVSAVTDVDYSPTGKEFVSASYDKTIRIYNAHHSHSRDIYHTKRM 325
            .||||||.|.|.||:.||.||||||.|||||||||||||||:||:|||:....|.||::|||:||
  Rat   261 YNLYTFDMRALDTPVMVHLDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTRRM 325

  Fly   326 QHVVCVAWSLDNRYVFSGSDEMNVRMWKANASEKLGVIRPRERVNFNYQEALKQKYAAHPQIKRI 390
            |||:||.|:.|::|:..||||||:|:|||||||||||:..|||...:|.:.||:|:..||.:|||
  Rat   326 QHVICVKWTSDSKYILCGSDEMNIRLWKANASEKLGVLTSRERAANDYNQKLKEKFQYHPHVKRI 390

  Fly   391 ARHRQVPRHVLNAQKKMRTVKEKEQVKEANVRKHTKKSKKVPYVSEKKKHVL 442
            ||||.:|:.:.:..::.|.:||..:.||.|.|||:|.. .||.|||:||||:
  Rat   391 ARHRHLPKSIYSQIQEQRVMKEARRRKEMNRRKHSKPG-SVPVVSERKKHVV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7275NP_648767.1 WD40 1..370 CDD:225201 230/368 (63%)
WD40 62..353 CDD:295369 168/290 (58%)
WD40 repeat 113..154 CDD:293791 21/40 (53%)
WD40 repeat 159..193 CDD:293791 14/33 (42%)
WD40 repeat 200..236 CDD:293791 19/35 (54%)
WD40 repeat 242..277 CDD:293791 25/34 (74%)
WD40 repeat 285..327 CDD:293791 29/41 (71%)
WD40 repeat 328..352 CDD:293791 13/23 (57%)
Sof1 354..439 CDD:282068 41/84 (49%)
Dcaf13NP_001167029.1 WD40 59..353 CDD:238121 168/293 (57%)
WD40 repeat 70..107 CDD:293791 18/36 (50%)
WD40 repeat 112..154 CDD:293791 22/41 (54%)
WD40 repeat 162..195 CDD:293791 13/32 (41%)
WD40 repeat 199..236 CDD:293791 19/36 (53%)
WD40 repeat 244..278 CDD:293791 24/33 (73%)
WD40 repeat 285..309 CDD:293791 20/23 (87%)
WD40 repeat 328..359 CDD:293791 19/30 (63%)
Sof1 354..440 CDD:398022 43/86 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339935
Domainoid 1 1.000 161 1.000 Domainoid score I3942
eggNOG 1 0.900 - - E1_KOG0268
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6430
Inparanoid 1 1.050 566 1.000 Inparanoid score I1029
OMA 1 1.010 - - QHG53609
OrthoDB 1 1.010 - - D361203at33208
OrthoFinder 1 1.000 - - FOG0005198
OrthoInspector 1 1.000 - - oto98549
orthoMCL 1 0.900 - - OOG6_102358
Panther 1 1.100 - - LDO PTHR22851
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3713
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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