DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7275 and SPBC1A4.07c

DIOPT Version :9

Sequence 1:NP_648767.1 Gene:CG7275 / 39669 FlyBaseID:FBgn0036500 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_595809.1 Gene:SPBC1A4.07c / 2540796 PomBaseID:SPBC1A4.07c Length:436 Species:Schizosaccharomyces pombe


Alignment Length:448 Identity:197/448 - (43%)
Similarity:281/448 - (62%) Gaps:22/448 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVKMISRNPDNYVRETKL-QQHKMPRNYDPSLHPLEGPREYVRALNATKLDRVFAKPFVCNLS- 63
            ||||.|:|.    ...|:| .|..:.||.||||||.|..|||.|||||||:||:||.||:..|. 
pombe     1 MKVKTITRG----TSLTRLNDQDPVKRNLDPSLHPFERAREYTRALNATKMDRMFAAPFLGQLGR 61

  Fly    64 GHRDGVSCFGKHPKQLSTLATGAYDGEVRIWDLANRISSRNFVAHDGFVRGIAYTQNGGRIFTVG 128
            ||:|||....:..|.|...|:|:.||.|::||.:.|.......||:|.|||:.:: |.|.:.:..
pombe    62 GHQDGVYSLARDTKTLIDCASGSGDGAVKLWDASERCERWTSKAHEGIVRGLVFS-NQGDVLSCA 125

  Fly   129 DDKTIKVWKAEAPEVGEDEVPVNTILSKFGLHGISHNRRDNKFATCGEVCAIWDERHNDPLKTLK 193
            .|:.:.:...:..:|....:..:::|.      |..::..:.|||.||..:|||...:.|:...:
pombe   126 SDRYVYMLNKQDGKVKRSYLGDSSLLD------IDTSKGGDLFATSGENVSIWDYSRDTPVTKFE 184

  Fly   194 WGVDTLHTISYNPVETSILACCASDRSIILYDQREAQPLRKVVLTMKSNKLAWNPMEAFNFTVAN 258
            ||.|||..:.:|..|||:||....||||::||.|.:.||.|::..:::|.::|||||||||...:
pombe   185 WGADTLPVVKFNYTETSVLASAGMDRSIVIYDLRTSSPLTKLITKLRTNSISWNPMEAFNFVAGS 249

  Fly   259 EDCNLYTFDTRKLQTPLKVHFDHVSAVTDVDYSPTGKEFVSASYDKTIRIYNAHHSHSRDIYHTK 323
            ||.|||.:|.|.|:..|.|:.||||||..||:||||:||||.||||||||||....||||:||||
pombe   250 EDHNLYMYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNVREGHSRDVYHTK 314

  Fly   324 RMQHVVCVAWSLDNRYVFSGSDEMNVRMWKANASEKLGVIRPRERVNFNYQEALKQKYAAHPQIK 388
            |||.|..|.:|:|.:|:|||||:.|||:|:|.||.:..:...||.....|.::|:::|...|:|:
pombe   315 RMQRVTAVKFSMDAQYIFSGSDDSNVRLWRARASSRASIRSTREENRLKYLDSLRERYKHIPEIR 379

  Fly   389 RIARHRQVPRHVLNAQKKMRTVKEKE----QVKEANVRKHTKKSKKVPYVSEKKKHVL 442
            ||||||.:|.:|    ||...:|.:|    :.:|.|:|:|:||. .|||..|:::||:
pombe   380 RIARHRHLPTNV----KKAAEIKREEINSLKRREENIRRHSKKG-AVPYEKERERHVV 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7275NP_648767.1 WD40 1..370 CDD:225201 168/370 (45%)
WD40 62..353 CDD:295369 128/291 (44%)
WD40 repeat 113..154 CDD:293791 6/40 (15%)
WD40 repeat 159..193 CDD:293791 10/33 (30%)
WD40 repeat 200..236 CDD:293791 16/35 (46%)
WD40 repeat 242..277 CDD:293791 19/34 (56%)
WD40 repeat 285..327 CDD:293791 31/41 (76%)
WD40 repeat 328..352 CDD:293791 13/23 (57%)
Sof1 354..439 CDD:282068 32/88 (36%)
SPBC1A4.07cNP_595809.1 WD40 <61..346 CDD:225201 128/291 (44%)
WD40 61..344 CDD:238121 127/289 (44%)
WD40 repeat 111..146 CDD:293791 6/35 (17%)
WD40 repeat 152..187 CDD:293791 11/40 (28%)
WD40 repeat 193..227 CDD:293791 16/33 (48%)
WD40 repeat 232..269 CDD:293791 19/36 (53%)
WD40 repeat 277..312 CDD:293791 24/34 (71%)
Sof1 345..429 CDD:282068 32/88 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 113 1.000 Domainoid score I1570
eggNOG 1 0.900 - - E1_KOG0268
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6430
Inparanoid 1 1.050 376 1.000 Inparanoid score I429
OMA 1 1.010 - - QHG53609
OrthoFinder 1 1.000 - - FOG0005198
OrthoInspector 1 1.000 - - oto102003
orthoMCL 1 0.900 - - OOG6_102358
Panther 1 1.100 - - LDO PTHR22851
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R295
SonicParanoid 1 1.000 - - X3713
TreeFam 1 0.960 - -
1413.860

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