DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7275 and Dcaf13

DIOPT Version :9

Sequence 1:NP_648767.1 Gene:CG7275 / 39669 FlyBaseID:FBgn0036500 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_941008.2 Gene:Dcaf13 / 223499 MGIID:2684929 Length:445 Species:Mus musculus


Alignment Length:442 Identity:262/442 - (59%)
Similarity:335/442 - (75%) Gaps:1/442 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVKMISRNPDNYVRETKLQQHKMPRNYDPSLHPLEGPREYVRALNATKLDRVFAKPFVCNLSGH 65
            |||||:|||||||||||||...::||||||:|||.|.|||||||||||||:|||||||:.:|.||
Mouse     1 MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGH 65

  Fly    66 RDGVSCFGKHPKQLSTLATGAYDGEVRIWDLANRISSRNFVAHDGFVRGIAYTQNGGRIFTVGDD 130
            ||||:|..||||.|:::.:||.||||:||:|..|...|...||:|||||:.....|...||||||
Mouse    66 RDGVNCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFCGTSFFTVGDD 130

  Fly   131 KTIKVWKAEAPEVGEDEVPVNTILSKFGLHGISHNRRDNKFATCGEVCAIWDERHNDPLKTLKWG 195
            ||:|.||.:.|..||:|.|:.|:|.|....||.|:.:|..|||||:...||||:...|:.::.||
Mouse   131 KTVKQWKMDGPGYGEEEEPLYTVLGKTVYTGIDHHWKDPVFATCGQQVDIWDEQRTSPVCSMNWG 195

  Fly   196 VDTLHTISYNPVETSILACCASDRSIILYDQREAQPLRKVVLTMKSNKLAWNPMEAFNFTVANED 260
            .|::.::.:|||||.:|..|||||:|:|||.|:|.||:||:|.|::|.:.||||||||||.||||
Mouse   196 FDSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLKKVILEMRTNTICWNPMEAFNFTAANED 260

  Fly   261 CNLYTFDTRKLQTPLKVHFDHVSAVTDVDYSPTGKEFVSASYDKTIRIYNAHHSHSRDIYHTKRM 325
            .||||||.|.|.||:.||.||||||.|||||||||||||||:||:|||:....|.||::||||||
Mouse   261 YNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRM 325

  Fly   326 QHVVCVAWSLDNRYVFSGSDEMNVRMWKANASEKLGVIRPRERVNFNYQEALKQKYAAHPQIKRI 390
            |||:||.|:.|::|:..||||||:|:|||||||||||:..||:...:|.:.||:|:..||.:|||
Mouse   326 QHVMCVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAANDYNQKLKEKFQYHPHVKRI 390

  Fly   391 ARHRQVPRHVLNAQKKMRTVKEKEQVKEANVRKHTKKSKKVPYVSEKKKHVL 442
            ||||.:|:.:.:..::.|.:||..:.||.|.|||:|.. .||.|||:||||:
Mouse   391 ARHRHLPKSIYSQIQEQRVMKEARRRKEMNRRKHSKPG-SVPIVSERKKHVV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7275NP_648767.1 WD40 1..370 CDD:225201 229/368 (62%)
WD40 62..353 CDD:295369 168/290 (58%)
WD40 repeat 113..154 CDD:293791 20/40 (50%)
WD40 repeat 159..193 CDD:293791 14/33 (42%)
WD40 repeat 200..236 CDD:293791 20/35 (57%)
WD40 repeat 242..277 CDD:293791 25/34 (74%)
WD40 repeat 285..327 CDD:293791 30/41 (73%)
WD40 repeat 328..352 CDD:293791 13/23 (57%)
Sof1 354..439 CDD:282068 40/84 (48%)
Dcaf13NP_941008.2 WD40 1..>360 CDD:225201 223/358 (62%)
WD40 59..353 CDD:238121 168/293 (57%)
WD 1 64..104 22/39 (56%)
WD40 repeat 70..107 CDD:293791 17/36 (47%)
WD 2 107..146 21/38 (55%)
WD40 repeat 112..154 CDD:293791 21/41 (51%)
WD 3 149..191 18/41 (44%)
WD40 repeat 162..195 CDD:293791 13/32 (41%)
WD 4 194..234 22/39 (56%)
WD40 repeat 199..267 CDD:293791 42/67 (63%)
WD 5 236..276 27/39 (69%)
WD 6 280..319 29/38 (76%)
WD40 repeat 285..327 CDD:293791 30/41 (73%)
WD 7 323..362 27/38 (71%)
WD40 repeat 328..352 CDD:293791 13/23 (57%)
Sof1 354..438 CDD:282068 40/84 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836277
Domainoid 1 1.000 161 1.000 Domainoid score I4029
eggNOG 1 0.900 - - E1_KOG0268
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6430
Inparanoid 1 1.050 563 1.000 Inparanoid score I1081
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53609
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005198
OrthoInspector 1 1.000 - - oto95053
orthoMCL 1 0.900 - - OOG6_102358
Panther 1 1.100 - - LDO PTHR22851
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R295
SonicParanoid 1 1.000 - - X3713
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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