Sequence 1: | NP_001261874.1 | Gene: | cocoon / 39665 | FlyBaseID: | FBgn0036496 | Length: | 318 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_683559.2 | Gene: | AT3G13224 / 820515 | AraportID: | AT3G13224 | Length: | 358 | Species: | Arabidopsis thaliana |
Alignment Length: | 240 | Identity: | 56/240 - (23%) |
---|---|---|---|
Similarity: | 101/240 - (42%) | Gaps: | 41/240 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 84 RQSEDNLENSTAKTKRTEAHLRCFDLIVLGLSYNTTEQDLREYFETYGDVVKAEIKKDTRSGHSK 148
Fly 149 GFGFVRFGSYDVQMHVLSKRHSIDGRWCEVK--VPASRGMGNQ----EPGKVFVGRCTEDIEADD 207
Fly 208 LREYFSKFGEVIDVFIPKPF-----RAFSFVTFLDPYVPRVVCGEKHII--KGVSVHVSTADKKN 265
Fly 266 VQNKNQLFQTNNYNNLDNNFKMQPANNFRMHPANNFSMHSFNPHG 310 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cocoon | NP_001261874.1 | RRM1_TDP43 | 108..184 | CDD:240767 | 23/77 (30%) |
RRM2_TDP43 | 193..262 | CDD:240768 | 18/75 (24%) | ||
AT3G13224 | NP_683559.2 | RRM_SF | 21..91 | CDD:418427 | 21/69 (30%) |
RRM_SF | 110..188 | CDD:418427 | 19/77 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR48033 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |