Protein Alignment cocoon and eif3g

DIOPT Version :10

• Sequence 1: NP_648764.1
• Gene: cocoon / 39665
• FlyBaseID: FBgn0036496
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001016749.1
• Gene: eif3g / 549503
• XenbaseID: XB-GENE-6070198
• Length: 310
• Species: Xenopus tropicalis
• Alignment Length: 137
• Identity: 36/137 - (26%)
• Similarity: 50/137 - (36%)
• Gaps: 31/137 - (22%)

  Fly    27 LSTLQAQFPESSGLQYRNVDTKAVRGVR--------SNEGRLYSPSEETGWGEYHYFCVFPKKNK 83
            |..:|.:..|..||.  ..|.:...|..        |..|:...||...|             ..
 Frog   164 LGPMQKELAEQLGLS--TGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDG-------------GS 213

  Fly    84 RQSEDNLENSTAKTKRTEAHLRCFDLIVLGLSYNTTEQDLREYFETYGDVVKAEIKKDTRSGHSK 148
            |:.|....|..|....|        :.|..||.:|.|.||:|.|..:|.:.:..:.||..:|.||
 Frog   214 RRGESMQPNRRADDNAT--------IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSK 270

  Fly   149 GFGFVRF 155
            ||.|:.|
 Frog   271 GFAFISF 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cocoon	NP_648764.1	TDP43_N	3..78	CDD:465833	12/58 (21%)
		RRM1_TDP43	108..181	CDD:409760	19/48 (40%)
		RRM2_TDP43	193..262	CDD:409761
eif3g	NP_001016749.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..32
		eIF3G	53..162	CDD:240597
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	179..229		11/62 (18%)
		RRM_eIF3G_like	230..305	CDD:409842	20/56 (36%)