Sequence 1: | NP_001261874.1 | Gene: | cocoon / 39665 | FlyBaseID: | FBgn0036496 | Length: | 318 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_511058.1 | Gene: | Spx / 31558 | FlyBaseID: | FBgn0015818 | Length: | 347 | Species: | Drosophila melanogaster |
Alignment Length: | 222 | Identity: | 55/222 - (24%) |
---|---|---|---|
Similarity: | 86/222 - (38%) | Gaps: | 57/222 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 113 GLSYNTTEQDLREYFETYGDVVKAEIKKDTRSGHSKGFGFVRF-----GSYDVQMHVLSKRHSID 172
Fly 173 GRWCEVKVPASRGMGNQEPG-KVFVGRCTEDIEADD--LREYFSKFGEVIDVFIPKPFR------ 228
Fly 229 --AFSFVTF---------LDPYVPRVVCGEKHIIKGVSVHVSTADKKNVQNKNQLFQTNNYNNLD 282
Fly 283 NNFKMQPANNFRMHPANNFSMHSFNPH 309 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cocoon | NP_001261874.1 | RRM1_TDP43 | 108..184 | CDD:240767 | 21/75 (28%) |
RRM2_TDP43 | 193..262 | CDD:240768 | 20/87 (23%) | ||
Spx | NP_511058.1 | RRM1_SF3B4 | 15..88 | CDD:240780 | 20/72 (28%) |
RRM2_SF3B4 | 99..181 | CDD:240781 | 24/109 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45439631 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |