DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-6 and Lrrtm1

DIOPT Version :9

Sequence 1:NP_001246765.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster
Sequence 2:NP_001349038.1 Gene:Lrrtm1 / 74342 MGIID:2389173 Length:522 Species:Mus musculus


Alignment Length:421 Identity:102/421 - (24%)
Similarity:178/421 - (42%) Gaps:91/421 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 NIWSLPDNIFCTLSELSALNMSENRLQDVNELGFRDRSKEPTNGSTESTSTTESAKKSSSSSTSC 275
            |:...|.|    ||.|..|::..|.|.::       |:.:.|.                      
Mouse    56 NLTEAPHN----LSGLLGLSLRYNSLSEL-------RAGQFTG---------------------- 87

  Fly   276 SLDLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVAL 340
            .:.|.:|.:.||....:..:.|..|||::.|::::|.|:.:|:.....:.||:.::||.||:.||
Mouse    88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQAL 152

  Fly   341 PTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLL 405
            ..:||....| :..::::.|:|..:..::|.:...|:.||:..||:.|  :.:|:|.||.:|..|
Mouse   153 APDLFHGLRK-LTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKS--LARNSFAGLFKLTEL 214

  Fly   406 NLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNG 470
            :|.||.|.|:....|..|.:|..|.||.|::. |...:...:.||..:.||.|:::|::.:....
Mouse   215 HLEHNDLIKVNFAHFPRLISLHSLCLRRNKVA-IVVSSLDWVWNLEKMDLSGNEIEYMEPHVFET 278

  Fly   471 LYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALRNMRHLRTVDLGENMITVME 535
            :..|..|.||:|.|..:.|....:..:|..:.|.||                ..|.|.|:..:..
Mouse   279 VPYLQTLQLDSNRLTYIEPRILNSWKSLTSITLAGN----------------LWDCGRNVCALAS 327

  Fly   536 -DSAFKG-------------------LGNLYGLRLIGNYLENITMHTFRDLPNLQILNLA-RNRI 579
             .|.|:|                   |..:|...|..:..|..:.|         :|::| .||.
Mouse   328 WLSNFQGRYDANLQCASPEYAQGEDVLDAVYAFHLCEDGAEPTSGH---------LLSVAVTNRS 383

  Fly   580 AVVEPGAFEMTSSIQAVRLDGNELNDINGLF 610
            .:..|      .|.....:||.|.:|  |.|
Mouse   384 DLTPP------ESSATTLVDGGEGHD--GTF 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-6NP_001246765.1 leucine-rich repeat 148..171 CDD:275380
LRR_8 171..236 CDD:290566 8/24 (33%)
leucine-rich repeat 172..201 CDD:275380
leucine-rich repeat 202..278 CDD:275380 11/66 (17%)
leucine-rich repeat 229..249 CDD:275380 4/19 (21%)
LRR_RI 278..468 CDD:238064 57/189 (30%)
leucine-rich repeat 279..302 CDD:275380 6/22 (27%)
LRR_8 301..386 CDD:290566 24/84 (29%)
leucine-rich repeat 303..326 CDD:275380 4/22 (18%)
leucine-rich repeat 327..350 CDD:275380 9/22 (41%)
LRR 350..729 CDD:227223 69/282 (24%)
leucine-rich repeat 352..375 CDD:275380 3/22 (14%)
leucine-rich repeat 376..401 CDD:275380 10/24 (42%)
LRR_RI <401..626 CDD:238064 55/231 (24%)
leucine-rich repeat 402..425 CDD:275380 9/22 (41%)
leucine-rich repeat 426..449 CDD:275380 6/22 (27%)
leucine-rich repeat 450..473 CDD:275380 5/22 (23%)
leucine-rich repeat 474..497 CDD:275380 7/22 (32%)
leucine-rich repeat 498..518 CDD:275380 4/19 (21%)
leucine-rich repeat 521..544 CDD:275380 7/42 (17%)
leucine-rich repeat 545..566 CDD:275380 4/20 (20%)
leucine-rich repeat 569..592 CDD:275380 5/23 (22%)
leucine-rich repeat 593..615 CDD:275380 6/18 (33%)
leucine-rich repeat 616..637 CDD:275380
leucine-rich repeat 638..662 CDD:275380
leucine-rich repeat 663..684 CDD:275380
leucine-rich repeat 685..708 CDD:275380
leucine-rich repeat 709..728 CDD:275380
LRR_8 883..943 CDD:290566
leucine-rich repeat 885..908 CDD:275380
leucine-rich repeat 909..932 CDD:275380
LRR_8 932..990 CDD:290566
leucine-rich repeat 933..956 CDD:275380
TIR 1114..1247 CDD:214587
Lrrtm1NP_001349038.1 LRR 1 64..87 7/29 (24%)
LRR <75..>315 CDD:227223 72/288 (25%)
LRR 2 89..111 5/21 (24%)
leucine-rich repeat 91..114 CDD:275380 6/22 (27%)
LRR 3 112..135 7/22 (32%)
leucine-rich repeat 115..138 CDD:275380 4/22 (18%)
LRR 4 136..159 10/22 (45%)
leucine-rich repeat 139..162 CDD:275380 9/22 (41%)
LRR 5 161..183 4/22 (18%)
leucine-rich repeat 163..186 CDD:275380 3/22 (14%)
LRR 6 184..207 8/24 (33%)
leucine-rich repeat 187..210 CDD:275380 10/24 (42%)
LRR 7 209..231 8/21 (38%)
leucine-rich repeat 211..234 CDD:275380 9/22 (41%)
LRR 8 233..255 6/22 (27%)
leucine-rich repeat 235..257 CDD:275380 6/22 (27%)
LRR 9 256..278 6/21 (29%)
leucine-rich repeat 258..281 CDD:275380 5/22 (23%)
LRR 10 280..302 7/21 (33%)
leucine-rich repeat 282..300 CDD:275380 7/17 (41%)
leucine-rich repeat 306..318 CDD:275378 4/27 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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