DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-6 and lrrn1

DIOPT Version :9

Sequence 1:NP_001246765.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster
Sequence 2:NP_001124166.1 Gene:lrrn1 / 568527 ZFINID:ZDB-GENE-071126-1 Length:717 Species:Danio rerio


Alignment Length:842 Identity:176/842 - (20%)
Similarity:301/842 - (35%) Gaps:271/842 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 IVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIR 401
            :..:|..|.|:    .|.:.||:|.|:..:.:| ..|..|..||||.|..::  |.......:.:
Zfish    64 LTRIPGNLSAD----TQVLLLQSNYIARTSEEL-EQLLNLTELDLSQNNFSN--IRDIGLTNMSQ 121

  Fly   402 LVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAY 466
            |..|:|..|::.::......||..||.|.:.|||:.:||.:.||.:.||..|.|:.|:||.:|:.
Zfish   122 LTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNRLKAIDSR 186

  Fly   467 ALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALRNMRHLRTVDLGENMI 531
            .......|.:|.:..|.::|:....|:..:.|:.|.|.|.:|..:|                   
Zfish   187 WFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIP------------------- 232

  Fly   532 TVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAV 596
                .:||.||.||..|....|.|..:.....:.||||:.|:|.:|.|..::.|.|:        
Zfish   233 ----GNAFVGLDNLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHKIQEGDFK-------- 285

  Fly   597 RLDGNELNDINGLFSNMPSLLWLNISD-NRLESFDYGHVPSTLQWLDLHKNRLSSLSNRFGLDSE 660
                           ||..|..|.|:: ..|.|.|                       ||.||:.
Zfish   286 ---------------NMLRLKELGINNMGELVSID-----------------------RFALDNL 312

  Fly   661 LKLQTLDVS----FNQLQRIGPSSIPNSIELLFLNDNLITTVDPDTFMHKTNLTRVDLYANQITT 721
            .:|..|:.:    |:.:.|:....:| ::|.|.||:|.:.:                ||  |.|.
Zfish   313 PELTKLEATNNPKFSYVSRLAFRDLP-ALESLMLNNNALNS----------------LY--QATA 358

  Fly   722 LDIKSLRILPVWEHRALPEFYIGGNPFTCDCNIDWLQKINHITSRQYPRIMDLETIYCKL----- 781
            ..:.:||           |..|..||..|||.|.|:.     :::...|.|:..:::|.:     
Zfish   359 DSLPNLR-----------EISIHSNPLRCDCVIQWMS-----SNKTTIRFMEPLSMFCTMPIEVR 407

  Fly   782 ------LNNRERA--YIPLIEAEPKHFLCTYKTHCFAVCHCCEFDACDCEMTCPTNCTCFHDQTW 838
                  :.:||.:  .:|:|..:      |:..|.          ..|..||...:|....:...
Zfish   408 GQRVRDVFSREPSGQCLPMISHD------TFPNHL----------NLDIGMTVDLDCRAMAEPEP 456

  Fly   839 STNIVECSGAAYSEMPRRVPMDTSELYIDGNNFVELAGHSFLGRKNLAVLYANNSNVAHIYNTTF 903
            ....|..||       .:|.|||                                 |:..|....
Zfish   457 EIYWVTPSG-------NKVMMDT---------------------------------VSDKYQLNS 481

  Fly   904 SGLKRLLILHLEDN-HIISLEGNEFHNLENLRELYLQSNKIASI-ANGSFQMLRKLEVLRLDGNR 966
            :|..|:..:.::|: |...:.    .|.|.      ...::.:| .||:.          ||..:
Zfish   482 AGTLRISYIQVDDSGHYTCVA----QNTEG------ADTRVTAIRVNGTL----------LDSTQ 526

  Fly   967 LMHFEV-----------WQLSANPYLVEISLADNQWSC--------ECGYLARF--------RNY 1004
            ||...|           |::::|     :..::.:||.        ...|.|:.        ..:
Zfish   527 LMKIYVKHTESHSILVSWKVNSN-----VMTSNLKWSSATMKIDNPHITYTAKVPVDVHEYNLTH 586

  Fly  1005 LGQSSE--------KIIDASRVSCIYNNAT------SVLREKNGTKCTLRDGVAHYMHTNEIEGL 1055
            |..::|        .|...::.||:  |.|      :|...:.||...|    |..|.|      
Zfish   587 LQPATEYEVCLSVSNIHQQTQKSCV--NVTTKHATFAVEISEQGTNTAL----AAVMGT------ 639

  Fly  1056 LPLLLVATCAFVAFFGLIFGLFCYRHELKIWAHSTNCL-MNFCYKSPRFVD--QLDKERPND 1114
             .|.:::..:...:....:....|.|.||.:...|:.: :|..|  |..::  :.|.|:..|
Zfish   640 -ILAIISLGSITLYIAKRWKRKNYHHSLKKYMQKTSSIPLNELY--PPLINLWEADSEKDKD 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-6NP_001246765.1 leucine-rich repeat 148..171 CDD:275380
LRR_8 171..236 CDD:290566
leucine-rich repeat 172..201 CDD:275380
leucine-rich repeat 202..278 CDD:275380
leucine-rich repeat 229..249 CDD:275380
LRR_RI 278..468 CDD:238064 41/130 (32%)
leucine-rich repeat 279..302 CDD:275380
LRR_8 301..386 CDD:290566 16/48 (33%)
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380 3/12 (25%)
LRR 350..729 CDD:227223 95/383 (25%)
leucine-rich repeat 352..375 CDD:275380 7/22 (32%)
leucine-rich repeat 376..401 CDD:275380 7/24 (29%)
LRR_RI <401..626 CDD:238064 59/225 (26%)
leucine-rich repeat 402..425 CDD:275380 6/22 (27%)
leucine-rich repeat 426..449 CDD:275380 10/22 (45%)
leucine-rich repeat 450..473 CDD:275380 7/22 (32%)
leucine-rich repeat 474..497 CDD:275380 5/22 (23%)
leucine-rich repeat 498..518 CDD:275380 6/19 (32%)
leucine-rich repeat 521..544 CDD:275380 4/22 (18%)
leucine-rich repeat 545..566 CDD:275380 4/20 (20%)
leucine-rich repeat 569..592 CDD:275380 7/22 (32%)
leucine-rich repeat 593..615 CDD:275380 2/21 (10%)
leucine-rich repeat 616..637 CDD:275380 6/21 (29%)
leucine-rich repeat 638..662 CDD:275380 4/23 (17%)
leucine-rich repeat 663..684 CDD:275380 5/24 (21%)
leucine-rich repeat 685..708 CDD:275380 5/22 (23%)
leucine-rich repeat 709..728 CDD:275380 4/18 (22%)
LRR_8 883..943 CDD:290566 8/60 (13%)
leucine-rich repeat 885..908 CDD:275380 3/22 (14%)
leucine-rich repeat 909..932 CDD:275380 3/23 (13%)
LRR_8 932..990 CDD:290566 10/69 (14%)
leucine-rich repeat 933..956 CDD:275380 3/23 (13%)
TIR 1114..1247 CDD:214587 1/1 (100%)
lrrn1NP_001124166.1 leucine-rich repeat 55..74 CDD:275380 2/9 (22%)
LRR_RI 86..>276 CDD:238064 60/215 (28%)
LRR_8 97..156 CDD:290566 18/60 (30%)
leucine-rich repeat 98..121 CDD:275380 7/24 (29%)
leucine-rich repeat 122..145 CDD:275380 6/22 (27%)
leucine-rich repeat 146..169 CDD:275380 10/22 (45%)
leucine-rich repeat 170..193 CDD:275380 7/22 (32%)
leucine-rich repeat 194..217 CDD:275380 5/22 (23%)
LRR_8 216..276 CDD:290566 22/82 (27%)
leucine-rich repeat 218..241 CDD:275380 10/45 (22%)
LRR_RI 242..401 CDD:238064 53/239 (22%)
leucine-rich repeat 242..265 CDD:275380 5/22 (23%)
LRR_8 264..324 CDD:290566 23/105 (22%)
leucine-rich repeat 266..289 CDD:275380 9/45 (20%)
leucine-rich repeat 290..314 CDD:275380 10/46 (22%)
LRR_8 313..374 CDD:290566 19/90 (21%)
leucine-rich repeat 315..337 CDD:275380 4/21 (19%)
leucine-rich repeat 340..353 CDD:275378 5/28 (18%)
leucine-rich repeat 364..376 CDD:275378 6/22 (27%)
LRRCT 372..414 CDD:214507 10/46 (22%)
IG_like 433..517 CDD:214653 21/143 (15%)
Ig 441..517 CDD:299845 19/125 (15%)
FN3 532..601 CDD:214495 9/73 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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